Search result

BaseInfo

ncRNA ID	novel_gma_miR809
Species	Glycine max
Class	miRNA
Genome position	Chr10:12259289-12259375 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451635;SRR1451646;SRR1295517;SRR1451612;SRR1451615;SRR1451618
Length	22
Mature sequence(if miRNA)	66 - CAAGAAAAUGAAUGGUGAGGAU - 87
Stem-loop(if miRNA)	--                   A    C         U   A     CCUUACCAUUUAUUUUCUU AGAU UAAUGGUUG AAU AGU   ||||||||||||||||||| |||| ||||||||| ||| ||A   GGAGUGGUAAGUAAAAGAA UCUA AUUACCAAU UUA UCA UA                   C    A         U   A
Stem-loop sequence	CCUUACCAUUUAUUUUCUUAAGAUCUAAUGGUUGUAAUAAGUAACUAAUUUUAACCAUUAAAUCUCAAGAAAAUGAAUGGUGAGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003520509.3	ncRNA:22   UAGGAGUGGUAAGUAAAAGAAC   1   |*||||||*||||||||||||* targets:2365   AACCUCACAAUUCAUUUUCUUU   2386 Target Full Sequence	2.0	PREDICTED: Glycine max isoamylase 2, chloroplastic-like (LOC100797949), mRNA	isoamylase 2, chloroplastic-like(LOC100797949)	coding protein	psRNATarget
BT090117.1	ncRNA:22   UAGGA-GUGGUAAGUAAAAGAAC   1   *||||-||||||||||||||||* targets:89   UUCCUUCACCAUUCAUUUUCUUU   111 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-3N9 unknown mRNA	NA	coding protein	psRNATarget
NM_001251455.2	ncRNA:22   UAGGA-GUGGUAAGUAAAAGAAC   1   *||||-||||||||||||||||* targets:87   UUCCUUCACCAUUCAUUUUCUUU   109 Target Full Sequence	3.0	Glycine max response regulator ARR6-like (LOC100306152), mRNA	uncharacterized LOC100306152(LOC100306152)	coding protein	psRNATarget