Search result

BaseInfo

ncRNA ID	novel_gma_miR806
Species	Glycine max
Class	miRNA
Genome position	Chr12:33958441-33958554 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294478;SRR1294479;SRR2045230;SRR2045236;SRR2045237;SRR2045238;SRR2045239;SRR1295520;SRR1295522;SRR1295523
Length	24
Mature sequence(if miRNA)	91 - AGGAAUUUUGACAAGCAUAAGACU - 114
Stem-loop(if miRNA)	--   A  U         A       --UGG     G        U     A  CUUA   AGG AU UUGACAAGC UAAGACU     GGUUG UAAAAGUU CAAAC CA    U   ||| || ||||||||| |||||||     ||||| |||||||| ||||| ||   UCC UA AACUGUUCG AUUCUGA     UCAAC AUUUUCAG GUUUG GU    C UC   C  C         G       UUUUA     A        U     A  AUAU
Stem-loop sequence	AGGAAUUUUGACAAGCAUAAGACUUGGGGUUGGUAAAAGUUUCAAACACACUUAUCUAUAUGAGUUUGUGACUUUUAACAACUAUUUUAGUCUUAGGCUUGUCAACAUCCCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006602307.2	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:914   CUCCUUAUCCUGGUCAAAAUUCCU   937 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X8, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_003551956.3	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:936   CUCCUUAUCCUGGUCAAAAUUCCU   959 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X9, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_006602306.2	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:973   CUCCUUAUCCUGGUCAAAAUUCCU   996 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X7, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_006602305.2	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:1006   CUCCUUAUCCUGGUCAAAAUUCCU   1029 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X4, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_014771070.1	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:1018   CUCCUUAUCCUGGUCAAAAUUCCU   1041 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X6, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_014771067.1	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:1054   CUCCUUAUCCUGGUCAAAAUUCCU   1077 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X2, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_014771069.1	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:1091   CUCCUUAUCCUGGUCAAAAUUCCU   1114 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X5, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_006602304.2	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:1095   CUCCUUAUCCUGGUCAAAAUUCCU   1118 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X1, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_014771071.1	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:1159   CUCCUUAUCCUGGUCAAAAUUCCU   1182 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X10, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget
XM_014771068.1	ncRNA:24   UCAGAAUACGAACAGUUUUAAGGA   1   ***|||||*||*|||||||||||| targets:1192   CUCCUUAUCCUGGUCAAAAUUCCU   1215 Target Full Sequence	2.5	PREDICTED: Glycine max probable inactive purple acid phosphatase 1 (LOC100817130), transcript variant X3, mRNA	probable inactive purple acid phosphatase 1(LOC100817130)	coding protein	psRNATarget