ncRNA ID | bra-miR5711 |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA4:15753060-15753167 [-] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 6 - UGUUUUGUGGGUUUCUACCGA - 26 |
Stem-loop(if miRNA) |
AUUGAUUA           A      U              AUAUUUU AGUACCACUCC         CAUACUCGGUA AAGCCU CAAAAUAUGAGUUA       G           C         ||||||||||| |||||| ||||||||||||||       |         GUAUGAGCCAU UUUGGG GUUUUGUACUCAAU       C           C --------           C      U              ------A AACACCGAAAA |
Stem-loop sequence | AUUGAUUACAUACUCGGUAAAAGCCUUCAAAAUAUGAGUUAAUAUUUUGAGUACCACUCCCCAAAAGCCACAACAUAACUCAUGUUUUGUGGGUUUCUACCGAGUAUG |
1 | PMID:22025521
"Identification of conserved and novel microRNAs that are responsive to heat stress in Brassica rapa"; Yu X, Wang H, Lu Y, de Ruiter M, Cariaso M, Prins M, van Tunen A, He Y; J Exp Bot. 63:1025-1038(2012). |