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BaseInfo

ncRNA ID novel_gma_miR804
Species Glycine max
Class miRNA
Genome position Chr1:26126946-26127093 [+]
Reference genome Glycine_max_v2.0
Source SRR1451635;SRR1451649;SRR1451617
Length 24
Mature sequence(if miRNA) 1 - AGUUAACGUCCGGAUAUAUUUGUC - 24
Stem-loop(if miRNA) --A        CC GA           CUUUUUACACUUUU GGGACUAAAUUUUGUAUUUUUAUUUUUUAGAGACACAU
   GUUAACGU  G  UAUAUUUGUCA              G                                      U
   ||||||||  |  |||||||||||              |
   CAGUUGUA  C  GUAUAAACAGU              A                                      U
UAA        UA UC           ------------AU ACAUAAAAGAACUGAAAAGCAGAAGGGUAAGGCGAUUG
Stem-loop sequence AGUUAACGUCCGGAUAUAUUUGUCACUUUUUACACUUUUGGGGACUAAAUUUUGUAUUUUUAUUUUUUAGAGACACAUUUGUUAGCGGAAUGGGAAGACGAAAAGUCAAGAAAAUACAAUAUGACAAAUAUGCUCAUAUGUUGACAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014779236.1
ncRNA:24   CUGUUUAUAUAGGCCUGCAAUUGA   1
  *||||||||||||||*||||||||
targets:1622   AACAAAUAUAUCCGGUCGUUAACU   1645

1.5 PREDICTED: Glycine max hyoscyamine 6-dioxygenase-like (LOC106799769), transcript variant X1, mRNA hyoscyamine 6-dioxygenase-like(LOC106799769) coding protein psRNATarget