ncRNA ID | novel_gma_miR804 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:26126946-26127093 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451635;SRR1451649;SRR1451617 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUUAACGUCCGGAUAUAUUUGUC - 24 |
Stem-loop(if miRNA) |
--A        CC GA           CUUUUUACACUUUU GGGACUAAAUUUUGUAUUUUUAUUUUUUAGAGACACAU    GUUAACGU  G  UAUAUUUGUCA              G                                      U    ||||||||  |  |||||||||||              |    CAGUUGUA  C  GUAUAAACAGU              A                                      U UAA        UA UC           ------------AU ACAUAAAAGAACUGAAAAGCAGAAGGGUAAGGCGAUUG |
Stem-loop sequence | AGUUAACGUCCGGAUAUAUUUGUCACUUUUUACACUUUUGGGGACUAAAUUUUGUAUUUUUAUUUUUUAGAGACACAUUUGUUAGCGGAAUGGGAAGACGAAAAGUCAAGAAAAUACAAUAUGACAAAUAUGCUCAUAUGUUGACAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014779236.1 |
|
1.5 | PREDICTED: Glycine max hyoscyamine 6-dioxygenase-like (LOC106799769), transcript variant X1, mRNA | hyoscyamine 6-dioxygenase-like(LOC106799769) | coding protein | psRNATarget |