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BaseInfo

ncRNA ID novel_gma_miR799
Species Glycine max
Class miRNA
Genome position Chr1:24331978-24332055 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1451635
Length 21
Mature sequence(if miRNA) 1 - AAUAGGAAGAGAAGUUGAACU - 21
Stem-loop(if miRNA) --                         ----A UGUGCCUC
  AAUAGGAAGAGAAGUUGAACUUUGA     G        A
  |||||||||||||||||||||||||     |
  UUAUUCUUCUUUUCAACUUGAAACU     C        C
UC                         ACUUA UCUUUGAA
Stem-loop sequence AAUAGGAAGAGAAGUUGAACUUUGAAGUGUGCCUCACAAGUUUCUCAUUCAUCAAAGUUCAACUUUUCUUCUUAUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006605672.2
ncRNA:21   UCAAGUUGAAGAGAAGGAUAA   1
  |*||||||||||||*|||||*
targets:12   ACUUCAACUUCUCUACCUAUC   32

2.5 PREDICTED: Glycine max probable leucine-rich repeat receptor-like protein kinase At2g33170 (LOC100805792), mRNA probable leucine-rich repeat receptor-like protein kinase At2g33170(LOC100805792) coding protein psRNATarget
AK244951.1
ncRNA:21   UCAAGU-UGAAGAGAAGGAUAA   1
  *|||*|-|||||||||||||||
targets:897   UGUUGAUACUUCUCUUCCUAUU   918

3.0 Glycine max cDNA, clone: GMFL01-17-J22 NA coding protein psRNATarget