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BaseInfo

ncRNA ID novel_gma_miR798
Species Glycine max
Class miRNA
Genome position Chr12:2174717-2174797 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634
Length 21
Mature sequence(if miRNA) 61 - UAAGGAUGAAAAACAAAAUAA - 81
Stem-loop(if miRNA) --                   UAAUA  U       -U  U
  GUUUUGUUUUUCGUCCUUA     CU UAAAUAG  GC U
  |||||||||||||||||||     || |||||||  ||
  UAAAACAAAAAGUAGGAAU     GA AUUUGUC  UG U
AA                   UUCGC  U       CC  U
Stem-loop sequence GUUUUGUUUUUCGUCCUUAUAAUACUUUAAAUAGUGCUUUUGUCCCUGUUUAUAGCGCUUUAAGGAUGAAAAACAAAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538745.3
ncRNA:21   AAUAAAACAAAAAGUAGGAAU   1
  *|||||*|||||||||||||*
targets:771   AUAUUUGGUUUUUCAUCCUUC   791

2.0 PREDICTED: Glycine max histidine triad nucleotide-binding protein 3 (LOC100799719), mRNA histidine triad nucleotide-binding protein 3(LOC100799719) coding protein psRNATarget
XM_003544458.3
ncRNA:21   AAUAAAACAAAAAGUAGGAAU   1
  ||=||||||||||||||=|||
targets:455   UUGUUUUGUUUUUCAUCUUUA   475

2.5 PREDICTED: Glycine max uncharacterized LOC100806012 (LOC100806012), mRNA uncharacterized LOC100806012(LOC100806012) coding protein psRNATarget