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BaseInfo

ncRNA ID novel_gma_miR793
Species Glycine max
Class miRNA
Genome position Chr9:30865090-30865162 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1295524;SRR1451610;SRR1451615;SRR1451616;SRR1451621
Length 24
Mature sequence(if miRNA) 50 - AUGGACAGAGCCCAAAUUCUCAAG - 73
Stem-loop(if miRNA) --           C          G  U       AA
  UGAGAAUUUGG CUCUGUCCAU UC AAUUAUU  U
  ||||||||||| |||||||||| || |||||||
  ACUCUUAAACC GAGACAGGUA AG UUAAUAA  U
GA           C          G  -       CC
Stem-loop sequence UGAGAAUUUGGCCUCUGUCCAUGUCUAAUUAUUAAUUCCAAUAAUUGAGAUGGACAGAGCCCAAAUUCUCAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170915.1
ncRNA:24   GAACUCUUAAACCCGAGACAGGUA   1
  |||||||||||||*||||||||||
targets:9   CUUGAGAAUUUGGCCUCUGUCCAU   32

1.5 Sequence 8579 from Patent EP2559767 NA coding protein psRNATarget
HI410454.1
ncRNA:24   GAACUCUUAAACCCGAGACAGGUA   1
  |||||||||||||*||||||||||
targets:9   CUUGAGAAUUUGGCCUCUGUCCAU   32

1.5 Sequence 8579 from Patent EP2074227 NA coding protein psRNATarget
LQ242584.1
ncRNA:24   GAACUCUUAAACCCGAGACAGGUA   1
  |||||||||||||*||||||||||
targets:9   CUUGAGAAUUUGGCCUCUGUCCAU   32

1.5 Sequence 8579 from Patent EP2985353 NA coding protein psRNATarget