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BaseInfo

ncRNA ID	novel_gma_miR789
Species	Glycine max
Class	miRNA
Genome position	Chr11:32146165-32146259 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451634
Length	21
Mature sequence(if miRNA)	1 - UCUCAUAAGCUAAAAUCAACU - 21
Stem-loop(if miRNA)	--                       --A   - U          A  AG   UCUCAUAAGCUAAAAUCAACUUA   GCA C UAACUUUUAU GA  C   |||||||||||||||||||||||   ||| | |||||||||| ||  A   AGAGUAUUCGAUUUUAGUUGAAU   CGU G AUUGAAGAUA CU  C AG                       ACA   C U          -  GU
Stem-loop sequence	UCUCAUAAGCUAAAAUCAACUUAAGCACUUAACUUUUAUAGAAGCACUGUCAUAGAAGUUAUGCUGCACAUAAGUUGAUUUUAGCUUAUGAGAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003518975.3	ncRNA:21   UCAACUAAAAUCGAAUACUCU   1   ||||||||||||=|||||||| targets:1121   AGUUGAUUUUAGUUUAUGAGA   1141 Target Full Sequence	1.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X3, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574485.2	ncRNA:21   UCAACUAAAAUCGAAUACUCU   1   ||||||||||||=|||||||| targets:1142   AGUUGAUUUUAGUUUAUGAGA   1162 Target Full Sequence	1.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X2, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574484.2	ncRNA:21   UCAACUAAAAUCGAAUACUCU   1   ||||||||||||=|||||||| targets:1154   AGUUGAUUUUAGUUUAUGAGA   1174 Target Full Sequence	1.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X1, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
AK286967.1	ncRNA:21   UCAACUAAAAUCGAAUACUCU   1   ||||||||||||||||||=|| targets:568   AGUUGAUUUUAGCUUAUGGGA   588 Target Full Sequence	1.5	Glycine max cDNA, clone: GMFL01-41-C10	NA	coding protein	psRNATarget
HI410449.1	ncRNA:21   UCAACUAAAAUCGAAUACUCU   1   ||*||||||||*||||||||| targets:82   AGGUGAUUUUAACUUAUGAGA   102 Target Full Sequence	2.5	Sequence 8574 from Patent EP2074227	NA	coding protein	psRNATarget
JB170910.1	ncRNA:21   UCAACUAAAAUCGAAUACUCU   1   ||*||||||||*||||||||| targets:82   AGGUGAUUUUAACUUAUGAGA   102 Target Full Sequence	2.5	Sequence 8574 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242579.1	ncRNA:21   UCAACUAAAAUCGAAUACUCU   1   ||*||||||||*||||||||| targets:82   AGGUGAUUUUAACUUAUGAGA   102 Target Full Sequence	2.5	Sequence 8574 from Patent EP2985353	NA	coding protein	psRNATarget
XM_003545228.3	ncRNA:21   UCAACUAAAAUCGAAUACUCU   1   =**||||||*||||||||||| targets:1721   GCAUGAUUUCAGCUUAUGAGA   1741 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At2g18940, chloroplastic-like (LOC100801933), mRNA	pentatricopeptide repeat-containing protein At2g18940, chloroplastic-like(LOC100801933)	coding protein	psRNATarget