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BaseInfo

ncRNA ID novel_gma_miR788
Species Glycine max
Class miRNA
Genome position Chr8:9106157-9106234 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1451645;SRR1451647;SRR2968978;SRR835759;SRR835761;SRR835763;SRR1451605;SRR1451609;SRR1451611;SRR1451621;SRR1451622
Length 21
Mature sequence(if miRNA) 58 - UGCCAAAGGAGAUUUGCCCUG - 78
Stem-loop(if miRNA) --GA          A       -UG       GAGG  UUG
    GCAAAUCUCC UUGGCAG   GGAAGUA    GC   A
    |||||||||| |||||||   |||||||    ||
    CGUUUAGAGG AACCGUU   UCUUCGU    CG   A
GUCC          A       UGG       ---A  UAC
Stem-loop sequence GAGCAAAUCUCCAUUGGCAGUGGGAAGUAGAGGGCUUGAACAUGCAUGCUUCUGGUUUGCCAAAGGAGAUUUGCCCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT090266.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  *=|||||||||||||||||||
targets:512   GGGGGCAAAUCUCCUUUGGCA   532

0.0 Soybean clone JCVI-FLGm-4E15 unknown mRNA NA coding protein psRNATarget
XM_003528406.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  *=|||||||||||||||||||
targets:710   GGGGGCAAAUCUCCUUUGGCA   730

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100809740), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100809740) coding protein psRNATarget
XM_014778124.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  *=|||||||||||||||||||
targets:710   GGGGGCAAAUCUCCUUUGGCA   730

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100809740), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100809740) coding protein psRNATarget
XM_003542700.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  *=|||||||||||||||||||
targets:1049   GGGGGCAAAUCUCCUUUGGCA   1069

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100306246) coding protein psRNATarget
XM_006594256.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  *=|||||||||||||||||||
targets:1084   GGGGGCAAAUCUCCUUUGGCA   1104

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100306246) coding protein psRNATarget
XM_006597376.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||||||||||||||||||
targets:1034   CUGGGCAAAUCUCCUUUGGCA   1054

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X3, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_006597376.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  **|||||||||||||||||||
targets:605   GUGGGCAAAUCUCCUUUGGCA   625

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X3, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_006597375.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||||||||||||||||||
targets:1033   CUGGGCAAAUCUCCUUUGGCA   1053

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_006597375.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  **|||||||||||||||||||
targets:604   GUGGGCAAAUCUCCUUUGGCA   624

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_003542998.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||||||||||||||||||
targets:1009   CUGGGCAAAUCUCCUUUGGCA   1029

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X3, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_003542998.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  **|||||||||||||||||||
targets:599   GUGGGCAAAUCUCCUUUGGCA   619

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X3, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_014765804.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||||||||||||||||||
targets:1012   CUGGGCAAAUCUCCUUUGGCA   1032

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_014765804.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  **|||||||||||||||||||
targets:602   GUGGGCAAAUCUCCUUUGGCA   622

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_003545918.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||||||||||||||||||
targets:1033   CUGGGCAAAUCUCCUUUGGCA   1053

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_003545918.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  **|||||||||||||||||||
targets:604   GUGGGCAAAUCUCCUUUGGCA   624

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_014765805.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||||||||||||||||||
targets:1012   CUGGGCAAAUCUCCUUUGGCA   1032

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_014765805.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  **|||||||||||||||||||
targets:602   GUGGGCAAAUCUCCUUUGGCA   622

0.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_003528406.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||*|||||||||||||||
targets:999   CUGGGAAAAUCUCCUUUGGCA   1019

1.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100809740), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100809740) coding protein psRNATarget
XM_003528406.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*|||||*|||||||||||||
targets:908   UUGGGCAUAUCUCCUUUGGCA   928

1.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100809740), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100809740) coding protein psRNATarget
XM_014778124.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||*|||||||||||||||
targets:999   CUGGGAAAAUCUCCUUUGGCA   1019

1.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100809740), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100809740) coding protein psRNATarget
XM_014778124.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*|||||*|||||||||||||
targets:908   UUGGGCAUAUCUCCUUUGGCA   928

1.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100809740), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100809740) coding protein psRNATarget
XM_003542700.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*|||||*|||||||||||||
targets:1233   UUGGGCAUAUCUCCUUUGGCA   1253

1.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100306246) coding protein psRNATarget
XM_006594256.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*|||||*|||||||||||||
targets:1268   UUGGGCAUAUCUCCUUUGGCA   1288

1.0 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100306246) coding protein psRNATarget
BT090266.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*||||||||||=||||||||
targets:362   CUGGGCAAAUCUUCUUUGGCA   382

1.5 Soybean clone JCVI-FLGm-4E15 unknown mRNA NA coding protein psRNATarget
XM_003528406.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*||||||||||=||||||||
targets:561   CUGGGCAAAUCUUCUUUGGCA   581

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100809740), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100809740) coding protein psRNATarget
XM_014778124.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*||||||||||=||||||||
targets:561   CUGGGCAAAUCUUCUUUGGCA   581

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100809740), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100809740) coding protein psRNATarget
XM_003542700.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*||||||||||=||||||||
targets:899   CUGGGCAAAUCUUCUUUGGCA   919

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100306246) coding protein psRNATarget
XM_006594256.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*||||||||||=||||||||
targets:934   CUGGGCAAAUCUUCUUUGGCA   954

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100306246) coding protein psRNATarget
XM_006597376.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*||||||*||||||||||||
targets:720   UUGGGCAACUCUCCUUUGGCA   740

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X3, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_006597375.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*||||||*||||||||||||
targets:719   UUGGGCAACUCUCCUUUGGCA   739

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_003542998.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  ||||||||||||*||||||||
targets:861   CAGGGCAAAUCUACUUUGGCA   881

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X3, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_003542998.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*||||||*||||||||||||
targets:710   UUGGGCAACUCUCCUUUGGCA   730

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X3, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_014765804.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  ||||||||||||*||||||||
targets:864   CAGGGCAAAUCUACUUUGGCA   884

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_014765804.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*||||||*||||||||||||
targets:713   UUGGGCAACUCUCCUUUGGCA   733

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_003545918.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*||||||*||||||||||||
targets:719   UUGGGCAACUCUCCUUUGGCA   739

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100784814), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100784814) coding protein psRNATarget
XM_014765805.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  ||||||||||||*||||||||
targets:864   CAGGGCAAAUCUACUUUGGCA   884

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_014765805.1
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  =*||||||*||||||||||||
targets:713   UUGGGCAACUCUCCUUUGGCA   733

1.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100805463), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100805463) coding protein psRNATarget
XM_003542700.3
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||*||||||=||||||||
targets:1323   CUGGGAAAAUCUUCUUUGGCA   1343

2.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X1, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100306246) coding protein psRNATarget
XM_006594256.2
ncRNA:21   GUCCCGUUUAGAGGAAACCGU   1
  |*|||*||||||=||||||||
targets:1358   CUGGGAAAAUCUUCUUUGGCA   1378

2.5 PREDICTED: Glycine max probable ubiquitin-conjugating enzyme E2 24 (LOC100306246), transcript variant X2, mRNA probable ubiquitin-conjugating enzyme E2 24(LOC100306246) coding protein psRNATarget
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