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BaseInfo

ncRNA ID novel_gma_miR772
Species Glycine max
Class miRNA
Genome position Chr9:8878783-8878927 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR1294479
Length 24
Mature sequence(if miRNA) 1 - UUUACUUUGUCAUGGAUACUUUUG - 24
Stem-loop(if miRNA) --UU      G   UG                      A             CCAA     CUUAU    A G
    UACUUU UCA  GAUACUUUUGUAUUGUUUAACU UCUUUUGAAUAAC    AUGUU     UUUC U G
    |||||| |||  |||||||||||||||||||||| |||||||||||||    |||||     |||| |
    AUGAAA AGU  UUAUGGAGAUAUAACAAGUUGA GGAGAAUUUAUUG    UACAG     AAAG A A
UAAU      A   UU                      A             UAUC     -UUUC    A A
Stem-loop sequence UUUACUUUGUCAUGGAUACUUUUGUAUUGUUUAACUAUCUUUUGAAUAACCCAAAUGUUCUUAUUUUCAUGGAAAAGAAACUUUGACAUCUAUGUUAUUUAAGAGGAAGUUGAACAAUAUAGAGGUAUUUUUGAAAAAGUAUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003525637.3
ncRNA:24   GUU-UUCAUAGGUACUGUUUCAUUU   1
  |||-|||**|||||||||||||||=
targets:525   CAAUAAGCUUCCAUGACAAAGUAAG   549

3.0 PREDICTED: Glycine max malate synthase, glyoxysomal-like (LOC100782820), mRNA malate synthase, glyoxysomal-like(LOC100782820) coding protein psRNATarget
XM_003549795.3
ncRNA:24   GUUUUCAUAGGUACUGUUUCAUUU   1
  ||*|||**|||||||||||||||=
targets:546   CAUAAGCUUCCAUGACAAAGUAAG   569

3.0 PREDICTED: Glycine max malate synthase, glyoxysomal-like (LOC100813906), mRNA malate synthase, glyoxysomal-like(LOC100813906) coding protein psRNATarget