ncRNA ID | novel_gma_miR772 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:8878783-8878927 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478;SRR1294479 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUACUUUGUCAUGGAUACUUUUG - 24 |
Stem-loop(if miRNA) |
--UU      G   UG                      A             CCAA     CUUAU    A G     UACUUU UCA  GAUACUUUUGUAUUGUUUAACU UCUUUUGAAUAAC    AUGUU     UUUC U G     |||||| |||  |||||||||||||||||||||| |||||||||||||    |||||     |||| |     AUGAAA AGU  UUAUGGAGAUAUAACAAGUUGA GGAGAAUUUAUUG    UACAG     AAAG A A UAAU      A   UU                      A             UAUC     -UUUC    A A |
Stem-loop sequence | UUUACUUUGUCAUGGAUACUUUUGUAUUGUUUAACUAUCUUUUGAAUAACCCAAAUGUUCUUAUUUUCAUGGAAAAGAAACUUUGACAUCUAUGUUAUUUAAGAGGAAGUUGAACAAUAUAGAGGUAUUUUUGAAAAAGUAUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003525637.3 |
|
3.0 | PREDICTED: Glycine max malate synthase, glyoxysomal-like (LOC100782820), mRNA | malate synthase, glyoxysomal-like(LOC100782820) | coding protein | psRNATarget | |||||||||
XM_003549795.3 |
|
3.0 | PREDICTED: Glycine max malate synthase, glyoxysomal-like (LOC100813906), mRNA | malate synthase, glyoxysomal-like(LOC100813906) | coding protein | psRNATarget |