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BaseInfo

ncRNA ID novel_gma_miR765
Species Glycine max
Class miRNA
Genome position Chr9:22338388-22338492 [-]
Reference genome Glycine_max_v2.0
Source SRR1294478
Length 21
Mature sequence(if miRNA) 1 - AAAGUGUAGGAAGUAAGAGCC - 21
Stem-loop(if miRNA) --  A             CUCC             GCACCA     ---A      C
  CU UUACUUCCUGCAC    CAAGUUGUUUCUU      CCUUU    UGGUUU C
  || |||||||||||||    |||||||||||||      |||||    |||||| A
  GA AAUGAAGGAUGUG    GUUCAACGAAGGA      GGAAG    ACUAAG G
CC  G             -AAA             ------     ACUG      G
Stem-loop sequence CUAUUACUUCCUGCACCUCCCAAGUUGUUUCUUGCACCACCUUUAUGGUUUCCAGGGAAUCAGUCAGAAGGAGGAAGCAACUUGAAAGUGUAGGAAGUAAGAGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535079.3
ncRNA:21   CCGAGAAUGAAGGAUGUGAAA   1
  |||||||||||||||||||||
targets:80   GGCUCUUACUUCCUACACUUU   100

0.0 PREDICTED: Glycine max uncharacterized LOC100796667 (LOC100796667), mRNA uncharacterized LOC100796667(LOC100796667) coding protein psRNATarget
XM_003532457.3
ncRNA:21   CCGAGAAUGAAGGAUGUGAAA   1
  **=||||||||=|||||||||
targets:840   UCUUCUUACUUUCUACACUUU   860

2.5 PREDICTED: Glycine max transcription factor BEE 3-like (LOC100777160), mRNA transcription factor BEE 3-like(LOC100777160) coding protein psRNATarget