ncRNA ID | novel_gma_miR759 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:6737682-6737843 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UAACAAAACGUGUACUCAUUUAU - 23 |
Stem-loop(if miRNA) |
--              C                       C          A        AA                CAU   UAACAAAACGUGUA UCAUUUAUUAUUUAUAAAUAAGA AAUAAUAAAU AAUUCAUU  UAACAAAAUGCGUAAU   U   |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||||   AUUGUUUUGCGCAU AGUAAAUAAUAAAUAUUUAUUCU UUAUUAUUUA UUGAGUAA  AUUGUUUUGCGCAUUA   U GU              A                       A          C        AA                UUA |
Stem-loop sequence | UAACAAAACGUGUACUCAUUUAUUAUUUAUAAAUAAGACAAUAAUAAAUAAAUUCAUUAAUAACAAAAUGCGUAAUCAUUUAUUAUUACGCGUUUUGUUAAAAAUGAGUUCAUUUAUUAUUAUCUUAUUUAUAAAUAAUAAAUGAAUACGCGUUUUGUUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003548115.3 |
|
2.0 | PREDICTED: Glycine max proline--tRNA ligase, chloroplastic/mitochondrial-like (LOC100788013), mRNA | proline--tRNA ligase, chloroplastic/mitochondrial-like(LOC100788013) | coding protein | psRNATarget | |||||||||
XM_003533936.3 |
|
2.0 | PREDICTED: Glycine max proline--tRNA ligase, chloroplastic/mitochondrial-like (LOC100815508), mRNA | proline--tRNA ligase, chloroplastic/mitochondrial-like(LOC100815508) | coding protein | psRNATarget |