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BaseInfo

ncRNA ID novel_gma_miR759
Species Glycine max
Class miRNA
Genome position Chr9:6737682-6737843 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478
Length 23
Mature sequence(if miRNA) 1 - UAACAAAACGUGUACUCAUUUAU - 23
Stem-loop(if miRNA) --              C                       C          A        AA                CAU
  UAACAAAACGUGUA UCAUUUAUUAUUUAUAAAUAAGA AAUAAUAAAU AAUUCAUU  UAACAAAAUGCGUAAU   U
  |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||||
  AUUGUUUUGCGCAU AGUAAAUAAUAAAUAUUUAUUCU UUAUUAUUUA UUGAGUAA  AUUGUUUUGCGCAUUA   U
GU              A                       A          C        AA                UUA
Stem-loop sequence UAACAAAACGUGUACUCAUUUAUUAUUUAUAAAUAAGACAAUAAUAAAUAAAUUCAUUAAUAACAAAAUGCGUAAUCAUUUAUUAUUACGCGUUUUGUUAAAAAUGAGUUCAUUUAUUAUUAUCUUAUUUAUAAAUAAUAAAUGAAUACGCGUUUUGUUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003548115.3
ncRNA:23   UAU---UUACUCAUGUGCAAAACAAU   1
  ||=---|||*|||||||||||||||=
targets:1012   AUGGGCAAUUAGUACACGUUUUGUUG   1037

2.0 PREDICTED: Glycine max proline--tRNA ligase, chloroplastic/mitochondrial-like (LOC100788013), mRNA proline--tRNA ligase, chloroplastic/mitochondrial-like(LOC100788013) coding protein psRNATarget
XM_003533936.3
ncRNA:23   UAU---UUACUCAUGUGCAAAACAAU   1
  ||=---|||*|||||||||||||||=
targets:1025   AUGGGCAAUUAGUACACGUUUUGUUG   1050

2.0 PREDICTED: Glycine max proline--tRNA ligase, chloroplastic/mitochondrial-like (LOC100815508), mRNA proline--tRNA ligase, chloroplastic/mitochondrial-like(LOC100815508) coding protein psRNATarget