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BaseInfo

ncRNA ID novel_gma_miR758
Species Glycine max
Class miRNA
Genome position Chr20:7353940-7354017 [-]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1451636;SRR1451643;SRR1451646;SRR1451657;SRR1451660;SRR1451662;SRR1753104;SRR1753108;SRR2045228;SRR1295520;SRR1295521;SRR1295524;SRR1295525;SRR1295530;SRR1295531;SRR1451604;SRR1451607;SRR1451610;SRR1451613;SRR1451614;SRR1451615;SRR1451616;SRR1451619;SRR1294476;SRR1451621;SRR1451625
Length 24
Mature sequence(if miRNA) 55 - UUAAUUGACCGAUGUAGAAAGCCU - 78
Stem-loop(if miRNA) -UUAA      G    A      ---CU         AGU
     UUGACC AUGU GAAAGC     UUUUUUAGU   G
     |||||| |||| ||||||     |||||||||   A
     GACUGG UGCA CUUUCG     AGAAGAUUA   U
ACAGA      -    G      AAACU         GGA
Stem-loop sequence UUAAUUGACCGAUGUAGAAAGCCUUUUUUUAGUAGUGAUAGGAUUAGAAGAUCAAAGCUUUCGACGUGGUCAGAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:24   UCCGAAAGAUGUAGCCAGUUAAUU   1
  ***|*|||*||||||||||*||||
targets:591   CAUCAUUCAACAUCGGUCAUUUAA   614

2.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget