ncRNA ID | novel_gma_miR758 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:7353940-7354017 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451634;SRR1451636;SRR1451643;SRR1451646;SRR1451657;SRR1451660;SRR1451662;SRR1753104;SRR1753108;SRR2045228;SRR1295520;SRR1295521;SRR1295524;SRR1295525;SRR1295530;SRR1295531;SRR1451604;SRR1451607;SRR1451610;SRR1451613;SRR1451614;SRR1451615;SRR1451616;SRR1451619;SRR1294476;SRR1451621;SRR1451625 |
Length | 24 |
Mature sequence(if miRNA) | 55 - UUAAUUGACCGAUGUAGAAAGCCU - 78 |
Stem-loop(if miRNA) |
-UUAA      G    A      ---CU         AGU      UUGACC AUGU GAAAGC     UUUUUUAGU   G      |||||| |||| ||||||     |||||||||   A      GACUGG UGCA CUUUCG     AGAAGAUUA   U ACAGA      -    G      AAACU         GGA |
Stem-loop sequence | UUAAUUGACCGAUGUAGAAAGCCUUUUUUUAGUAGUGAUAGGAUUAGAAGAUCAAAGCUUUCGACGUGGUCAGAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767461.1 |
|
2.5 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget |