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BaseInfo

ncRNA ID novel_gma_miR757
Species Glycine max
Class miRNA
Genome position Chr10:889206-889290 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1451635;SRR1294479;SRR1451638;SRR1451639;SRR1451641;SRR1451642;SRR1451643;SRR1451645;SRR1451646;SRR1451648;SRR2968974;SRR2968978;SRR3067737;SRR3067738;SRR835758;SRR835759;SRR835761;SRR835762;SRR835763;SRR835765;SRR835766;SRR835768;SRR835770;SRR835771;SRR835772;SRR835773;SRR1451605;SRR1451616;SRR1451625;SRR1451626;SRR1451627
Length 21
Mature sequence(if miRNA) 65 - UAUAAAUAGGACCAGAGGUAG - 85
Stem-loop(if miRNA) --       C       UU             UUAUA       
  ACCUCUG UCCUAUU  UAUAAGAAACAAG     UAGUGUAA
  ||||||| |||||||  |||||||||||||     |||||||A
  UGGAGAC AGGAUAA  AUAUUCUUUGUUC     AUCACAUA
GA       C       --             --UAC       
Stem-loop sequence ACCUCUGCUCCUAUUUUUAUAAGAAACAAGUUAUAUAGUGUAAAAUACACUACAUCUUGUUUCUUAUAAAUAGGACCAGAGGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003541465.3
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =*=||||||||||||||||||
targets:1563   UGGCCUCUGGUCCUAUUUAUA   1583

1.0 PREDICTED: Glycine max peroxidase 19 (LOC100777463), mRNA peroxidase 19(LOC100777463) coding protein psRNATarget
XM_014764194.1
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:678   UUGCCUCUGGUCCUUUUUAUA   698

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X9, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591237.2
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:690   UUGCCUCUGGUCCUUUUUAUA   710

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X8, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591232.2
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:715   UUGCCUCUGGUCCUUUUUAUA   735

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X3, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591234.2
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:877   UUGCCUCUGGUCCUUUUUAUA   897

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X4, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591233.2
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:882   UUGCCUCUGGUCCUUUUUAUA   902

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X2, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_014764193.1
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:927   UUGCCUCUGGUCCUUUUUAUA   947

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X7, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591236.2
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:938   UUGCCUCUGGUCCUUUUUAUA   958

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X5, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_003538317.3
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:959   UUGCCUCUGGUCCUUUUUAUA   979

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X1, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget
XM_006591235.2
ncRNA:21   GAUGGAGACCAGGAUAAAUAU   1
  =|=|||||||||||*||||||
targets:971   UUGCCUCUGGUCCUUUUUAUA   991

2.5 PREDICTED: Glycine max COX assembly mitochondrial protein 2 homolog (LOC100789163), transcript variant X6, mRNA COX assembly mitochondrial protein 2 homolog(LOC100789163) coding protein psRNATarget