ncRNA ID | novel_gma_miR754 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:37119428-37119524 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451634 |
Length | 21 |
Mature sequence(if miRNA) | 77 - UUAUGAGAUAAGCUUAAUUCA - 97 |
Stem-loop(if miRNA) |
--          C  C       CC    A     C -UUA      UA   GAUUAAGCUU UC CAUAAGC  AAAU AGCUU C    AAAGUU  U   |||||||||| || |||||||  |||| ||||| |    ||||||   UUAAUUCGAA AG GUAUUCG  UUUA UCGAA G    UUUCAA  U AC          U  A       AU    A     U UGUA      UU |
Stem-loop sequence | GAUUAAGCUUCUCCCAUAAGCCCAAAUAAGCUUCCUUAAAAGUUUAUUUUAACUUUAUGUGUAAGCUAAUUUUAGCUUAUGAGAUAAGCUUAAUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK244400.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-02-O14 | NA | coding protein | psRNATarget | |||||||||
XM_006582089.2 |
|
2.5 | PREDICTED: Glycine max myosin-8-like (LOC100793791), transcript variant X2, mRNA | myosin-8-like(LOC100793791) | coding protein | psRNATarget | |||||||||
XM_014776697.1 |
|
2.5 | PREDICTED: Glycine max myosin-8-like (LOC100793791), transcript variant X1, mRNA | myosin-8-like(LOC100793791) | coding protein | psRNATarget |