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BaseInfo

ncRNA ID novel_gma_miR754
Species Glycine max
Class miRNA
Genome position Chr20:37119428-37119524 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634
Length 21
Mature sequence(if miRNA) 77 - UUAUGAGAUAAGCUUAAUUCA - 97
Stem-loop(if miRNA) --          C  C       CC    A     C -UUA      UA
  GAUUAAGCUU UC CAUAAGC  AAAU AGCUU C    AAAGUU  U
  |||||||||| || |||||||  |||| ||||| |    ||||||
  UUAAUUCGAA AG GUAUUCG  UUUA UCGAA G    UUUCAA  U
AC          U  A       AU    A     U UGUA      UU
Stem-loop sequence GAUUAAGCUUCUCCCAUAAGCCCAAAUAAGCUUCCUUAAAAGUUUAUUUUAACUUUAUGUGUAAGCUAAUUUUAGCUUAUGAGAUAAGCUUAAUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK244400.1
ncRNA:21   ACUUAAUUCGAAUAGAGUAUU   1
  ||||||=|||||*||||||||
targets:1537   UGAAUUGAGCUUCUCUCAUAA   1557

2.5 Glycine max cDNA, clone: GMFL01-02-O14 NA coding protein psRNATarget
XM_006582089.2
ncRNA:21   ACUUAAUUCGAAUAGAGUAUU   1
  |||=||||||||||||||*||
targets:2428   UGAGUUAAGCUUAUCUCAAAA   2448

2.5 PREDICTED: Glycine max myosin-8-like (LOC100793791), transcript variant X2, mRNA myosin-8-like(LOC100793791) coding protein psRNATarget
XM_014776697.1
ncRNA:21   ACUUAAUUCGAAUAGAGUAUU   1
  |||=||||||||||||||*||
targets:2525   UGAGUUAAGCUUAUCUCAAAA   2545

2.5 PREDICTED: Glycine max myosin-8-like (LOC100793791), transcript variant X1, mRNA myosin-8-like(LOC100793791) coding protein psRNATarget