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BaseInfo

ncRNA ID novel_gma_miR748
Species Glycine max
Class miRNA
Genome position Chr19:32871407-32871504 [-]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1294484;SRR2045231;SRR1451616;SRR1451617;SRR1451619
Length 24
Mature sequence(if miRNA) 75 - UAUUAGGACAACCGAUGUAGAAAU - 98
Stem-loop(if miRNA) --          A           A  CAA  -     A  UG    UAA
  UAUUAGGACA CCGAUGUAGAA UC   CA UUCUA GA  GGUU   A
  |||||||||| ||||||||||| ||   || ||||| ||  ||||
  AUAAUCCUGU GGCUACAUCUU AG   GU AAGAU CU  UCAA   G
UA          C           C  AUG  U     -  GU    CCA
Stem-loop sequence UAUUAGGACAACCGAUGUAGAAAUCCAACAUUCUAAGAUGGGUUUAAAGACCAACUUGUCUAGAAUUGGUAGACUUCUACAUCGGCUGUCCUAAUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:24   UAAAGAUGUAGCCAACAGGAUUAU   1
  ||||||||||=|||||||||||||
targets:2109   AUUUCUACAUUGGUUGUCCUAAUA   2132

1.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014767461.1
ncRNA:24   UAAAGAUGUAGCCAACAGGAUUAU   1
  |*|*|||||||||||*||||||||
targets:2251   AAUCCUACAUCGGUUAUCCUAAUA   2274

1.5 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014771283.1
ncRNA:24   UA--AAGAUGUAGCCAACAGGAUUAU   1
  ||--|||*||||||||||||*|||||
targets:1868   AUAAUUCAACAUCGGUUGUCAUAAUA   1893

2.5 PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X1, mRNA protein NRT1/ PTR FAMILY 7.3-like(LOC100803433) coding protein psRNATarget
XM_014771284.1
ncRNA:24   UA--AAGAUGUAGCCAACAGGAUUAU   1
  ||--|||*||||||||||||*|||||
targets:1932   AUAAUUCAACAUCGGUUGUCAUAAUA   1957

2.5 PREDICTED: Glycine max protein NRT1/ PTR FAMILY 7.3-like (LOC100803433), transcript variant X2, mRNA protein NRT1/ PTR FAMILY 7.3-like(LOC100803433) coding protein psRNATarget