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BaseInfo

ncRNA ID novel_gma_miR746
Species Glycine max
Class miRNA
Genome position Chr1:13329482-13329565 [-]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1451611;SRR1451613;SRR1451619
Length 21
Mature sequence(if miRNA) 64 - UUCUACUACGACUUCUACUUC - 84
Stem-loop(if miRNA) --      U   A                   A       CA
  UUCUAC ACG CUUCUACUUCAAACACGUC UAGAAAG  A
  |||||| ||| ||||||||||||||||||| |||||||
  AAGAUG UGC GAAGGUGAAGUUUGUGCGG AUCUUUU  U
GU      C   C                   C       AC
Stem-loop sequence UUCUACUACGACUUCUACUUCAAACACGUCAUAGAAAGCAAUCAUUUUCUACGGCGUGUUUGAAGUGGAAGCCGUCGUAGAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003517070.3
ncRNA:21   CUUCAUCUUCAGCAUCAUCUU   1
  |||||||*|||*|||||||||
targets:146   GAAGUAGUAGUAGUAGUAGAA   166

2.5 PREDICTED: Glycine max plant intracellular Ras-group-related LRR protein 4 (LOC100787496), mRNA plant intracellular Ras-group-related LRR protein 4(LOC100787496) coding protein psRNATarget
XM_003547944.3
ncRNA:21   CUUCAUCUUCAGCAUCAUCUU   1
  *=|||||*|||*|||||||||
targets:348   AGAGUAGUAGUAGUAGUAGAA   368

2.5 PREDICTED: Glycine max protein indeterminate-domain 2-like (LOC100783947), mRNA protein indeterminate-domain 2-like(LOC100783947) coding protein psRNATarget
XM_003538474.3
ncRNA:21   CUUCAUCUUCAGCAUCAUCUU   1
  |*|||||*|||*|||||||||
targets:359   GUAGUAGUAGUAGUAGUAGAA   379

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like (LOC100784025), mRNA pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like(LOC100784025) coding protein psRNATarget