ncRNA ID | novel_gma_miR745 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:17155873-17156069 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451634;SRR1451648;SRR1451650;SRR1451652;SRR1451653;SRR1451654;SRR1451657;SRR1451664;SRR1295518;SRR1295519;SRR1295524;SRR1295530 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGGAUCAUGAGAACCCUAAGGCC - 23 |
Stem-loop(if miRNA) |
--   A              A         UC               G                              CA                GA   AGG UCAUGAGAACCCUA GGCCUUCUC  GCAUCUCUGGCCCAA CUUCUUGGAGUCUUCUAUCCAAUGUCCUUG  GGGUAGGAUUGCAUCA  G   ||| |||||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||  G   UCC AGUACUCUUGGGAU CCGGAAGAG  CGUAGAGACCGGGUU GAAGAACCUCAGAAGAUAGGUUACGGGAAC  CCCAUCUUAACGUAGU  G AU   G              C         GA               A                              CC                AG |
Stem-loop sequence | AGGAUCAUGAGAACCCUAAGGCCUUCUCUCGCAUCUCUGGCCCAAGCUUCUUGGAGUCUUCUAUCCAAUGUCCUUGCAGGGUAGGAUUGCAUCAGAGGGGAUGAUGCAAUUCUACCCCCCAAGGGCAUUGGAUAGAAGACUCCAAGAAGAUUGGGCCAGAGAUGCAGGAGAAGGCCCUAGGGUUCUCAUGAGCCUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014772498.1 |
|
2.5 | PREDICTED: Glycine max vacuolar protein-sorting-associated protein 37 homolog 2-like (LOC100801006), partial mRNA | vacuolar protein-sorting-associated protein 37 homolog 2-like(LOC100801006) | coding protein | psRNATarget |