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BaseInfo

ncRNA ID novel_gma_miR745
Species Glycine max
Class miRNA
Genome position Chr19:17155873-17156069 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1451648;SRR1451650;SRR1451652;SRR1451653;SRR1451654;SRR1451657;SRR1451664;SRR1295518;SRR1295519;SRR1295524;SRR1295530
Length 23
Mature sequence(if miRNA) 1 - AGGAUCAUGAGAACCCUAAGGCC - 23
Stem-loop(if miRNA) --   A              A         UC               G                              CA                GA
  AGG UCAUGAGAACCCUA GGCCUUCUC  GCAUCUCUGGCCCAA CUUCUUGGAGUCUUCUAUCCAAUGUCCUUG  GGGUAGGAUUGCAUCA  G
  ||| |||||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||  G
  UCC AGUACUCUUGGGAU CCGGAAGAG  CGUAGAGACCGGGUU GAAGAACCUCAGAAGAUAGGUUACGGGAAC  CCCAUCUUAACGUAGU  G
AU   G              C         GA               A                              CC                AG
Stem-loop sequence AGGAUCAUGAGAACCCUAAGGCCUUCUCUCGCAUCUCUGGCCCAAGCUUCUUGGAGUCUUCUAUCCAAUGUCCUUGCAGGGUAGGAUUGCAUCAGAGGGGAUGAUGCAAUUCUACCCCCCAAGGGCAUUGGAUAGAAGACUCCAAGAAGAUUGGGCCAGAGAUGCAGGAGAAGGCCCUAGGGUUCUCAUGAGCCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772498.1
ncRNA:23   CCGGAAUCCCAAGAGUACUAGGA   1
  ||||*||||||||||||||*|||
targets:2667   GGCCCUAGGGUUCUCAUGAGCCU   2689

2.5 PREDICTED: Glycine max vacuolar protein-sorting-associated protein 37 homolog 2-like (LOC100801006), partial mRNA vacuolar protein-sorting-associated protein 37 homolog 2-like(LOC100801006) coding protein psRNATarget