ncRNA ID | novel_gma_miR741 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:38936383-38936600 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451634;SRR1451647 |
Length | 24 |
Mature sequence(if miRNA) | 195 - AAUAACCGUCUUUGAUUGUAAAGU - 218 |
Stem-loop(if miRNA) |
--               -    AAA   U  CAUACCU                                     ACUUAU  UGACACACA         C A     A   AAUAACCGUCUUUGA UUGU   GUC GA       UUCAAAGAUGGUUAUUAGCUAAUGACUGUCUUUGAAU      UC         AUUCAAAGA G UUAUU G   ||||||||||||||| ||||   ||| ||       |||||||||||||||||||||||||||||||||||||      ||         ||||||||| | |||||   UUAUUGGCAGAAACU GACA   CAG CU       AAGUUUCUGCUAAUAAUCGAUUAUUGACAGAAACUUA      AG         UAAGUUUCU C AAUAA C GA               U    -CA   U  UAUCCGU                                     CAACAU  UUUCAAAUG         A C     A |
Stem-loop sequence | AAUAACCGUCUUUGAUUGUAAAGUCUGACAUACCUUUCAAAGAUGGUUAUUAGCUAAUGACUGUCUUUGAAUACUUAUUCUGACACACAAUUCAAAGACGAUUAUUAGCAAAUAACCAUCUUUGAAUGUAAACUUUGAUACAACAUUCAAAGACAGUUAUUAGCUAAUAAUCGUCUUUGAAUGCCUAUUCUGACACACAGUUCAAAGACGGUUAUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
1.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
1.0 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
2.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget |