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BaseInfo

ncRNA ID novel_gma_miR739
Species Glycine max
Class miRNA
Genome position Chr17:13200709-13200859 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1295519;SRR1295527;SRR1451619
Length 24
Mature sequence(if miRNA) 1 - AGUUAACGUCCGGAUAUAUUUGUC - 24
Stem-loop(if miRNA) --A        CC              ----------------CA    UUACACUUUUGAGGACUAAAUUUUGUAUUUUUCA
   GUUAACGU  GGAUAUAUUUGUCA                  CUUU                                  U
   ||||||||  ||||||||||||||                  ||||                                  C
   CGGUUGUA  CCUGUAUAAACAGU                  AAAG                                  U
UAA        UA              AUAUUAUAAAAGAACUAA    CAAAAAGGUGAGACAACUGUUUACACAGGGAUUU
Stem-loop sequence AGUUAACGUCCGGAUAUAUUUGUCACACUUUUUACACUUUUGAGGACUAAAUUUUGUAUUUUUCAUCUUUUAGGGACACAUUUGUCAACAGAGUGGAAAAACGAAAAAUCAAGAAAAUAUUAUAUGACAAAUAUGUCCAUAUGUUGGCAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014779236.1
ncRNA:24   CUGUUUAUAUAGGCCUGCAAUUGA   1
  *||||||||||||||*||||||||
targets:1622   AACAAAUAUAUCCGGUCGUUAACU   1645

1.5 PREDICTED: Glycine max hyoscyamine 6-dioxygenase-like (LOC106799769), transcript variant X1, mRNA hyoscyamine 6-dioxygenase-like(LOC106799769) coding protein psRNATarget