ncRNA ID | novel_gma_miR739 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:13200709-13200859 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451634;SRR1295519;SRR1295527;SRR1451619 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUUAACGUCCGGAUAUAUUUGUC - 24 |
Stem-loop(if miRNA) |
--A        CC              ----------------CA    UUACACUUUUGAGGACUAAAUUUUGUAUUUUUCA    GUUAACGU  GGAUAUAUUUGUCA                  CUUU                                  U    ||||||||  ||||||||||||||                  ||||                                  C    CGGUUGUA  CCUGUAUAAACAGU                  AAAG                                  U UAA        UA              AUAUUAUAAAAGAACUAA    CAAAAAGGUGAGACAACUGUUUACACAGGGAUUU |
Stem-loop sequence | AGUUAACGUCCGGAUAUAUUUGUCACACUUUUUACACUUUUGAGGACUAAAUUUUGUAUUUUUCAUCUUUUAGGGACACAUUUGUCAACAGAGUGGAAAAACGAAAAAUCAAGAAAAUAUUAUAUGACAAAUAUGUCCAUAUGUUGGCAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014779236.1 |
|
1.5 | PREDICTED: Glycine max hyoscyamine 6-dioxygenase-like (LOC106799769), transcript variant X1, mRNA | hyoscyamine 6-dioxygenase-like(LOC106799769) | coding protein | psRNATarget |