ncRNA ID | novel_gma_miR728 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:20387099-20387321 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451634;SRR1451636;SRR1451639;SRR1294483;SRR1451657;SRR1295516;SRR1295521;SRR1295525;SRR1295526;SRR1295527;SRR1295530;SRR1451604;SRR1451605;SRR1451606;SRR1292928;SRR1451607;SRR1292929;SRR1451610;SRR1451611;SRR1451615;SRR1451617;SRR1451622;SRR1451623;SRR1451624;SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACAUGGUAUCAGGGCCUGAUAGA - 24 |
Stem-loop(if miRNA) |
--             A            ---UU         -   A              -UAAUU   CC   C      A    - UC     U       AUA         A   UGUCAGGCUUUGA UACCAUGUUAAA     AGAAACAGA GGA UAAUUGAUUGAAAA      UGC  GAA UACACA CGGA G  UGUUU AUAUAGG   AAUUACAUU A   ||||||||||||| ||||||||||||     ||||||||| ||| ||||||||||||||      |||  ||| |||||| |||| |  ||||| |||||||   |||||||||   AUAGUCCGGGACU AUGGUACAAUUU     UCUUUGUUU CCU AUUGACUGACUUUU      ACG  CUU AUGUGU GCUU C  ACAAA UAUAUCU   UUAAUGUAA U AG             -            UAUGU         G   -              UGGCUC   AA   -      C    A UC     -       -GA         U |
Stem-loop sequence | UGUCAGGCUUUGAAUACCAUGUUAAAUUAGAAACAGAGGAAUAAUUGAUUGAAAAUAAUUUGCCCGAACUACACAACGGAGUCUGUUUUAUAUAGGAUAAAUUACAUUAAUUAAUGUAAUUAGUCUAUAUAAACACUCAUUCGCUGUGUAUUCAAGCACUCGGUUUUUCAGUCAGUUAUCCGUUUGUUUCUUGUAUUUUAACAUGGUAUCAGGGCCUGAUAGA |