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BaseInfo

ncRNA ID novel_gma_miR725
Species Glycine max
Class miRNA
Genome position Chr16:19359184-19359234 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634;SRR1451635;SRR1451641;SRR1451645;SRR1451649;SRR1451652;SRR1451662;SRR3160569;SRR1451613;SRR1451618;SRR1451620;SRR1451624
Length 21
Mature sequence(if miRNA) 31 - CGAAUUGUCAAUCUGUAUGUU - 51
Stem-loop(if miRNA) --           U    C    AG
  UAUACGGAUUG CAAU CGUA  A
  ||||||||||| |||| ||||  U
  GUAUGUCUAAC GUUA GCAU  U
UU           U    A    AC
Stem-loop sequence UAUACGGAUUGUCAAUCCGUAAGAUUCAUACGAAUUGUCAAUCUGUAUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538112.3
ncRNA:21   UUGUAUGUCUAACUGUUAAGC   1
  |=||*|*|||||||||||||*
targets:2178   AGCAAAAAGAUUGACAAUUCU   2198

3.0 PREDICTED: Glycine max auxin response factor 18-like (LOC100810558), mRNA auxin response factor 18-like(LOC100810558) coding protein psRNATarget
XM_003540137.3
ncRNA:21   UUGUAUGUCUAACUGUUAAGC   1
  |=||*|*|||||||||||||*
targets:2291   AGCAAAAAGAUUGACAAUUCU   2311

3.0 PREDICTED: Glycine max auxin response factor 18-like (LOC100778135), transcript variant X1, mRNA auxin response factor 18-like(LOC100778135) coding protein psRNATarget
XM_006592639.2
ncRNA:21   UUGUAUGUCUAACUGUUAAGC   1
  |=||*|*|||||||||||||*
targets:2338   AGCAAAAAGAUUGACAAUUCU   2358

3.0 PREDICTED: Glycine max auxin response factor 18-like (LOC100778135), transcript variant X2, mRNA auxin response factor 18-like(LOC100778135) coding protein psRNATarget
XM_003539718.3
ncRNA:21   UUGUAUGUCUAACUGUUAAGC   1
  |=||*|*|||||||||||||*
targets:2226   AGCAAAAAGAUUGACAAUUCU   2246

3.0 PREDICTED: Glycine max auxin response factor 18-like (LOC100814686), mRNA auxin response factor 18-like(LOC100814686) coding protein psRNATarget