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BaseInfo

ncRNA ID novel_gma_miR723
Species Glycine max
Class miRNA
Genome position Chr1:46320740-46320827 [-]
Reference genome Glycine_max_v2.0
Source SRR1451634
Length 22
Mature sequence(if miRNA) 1 - AACCAUUGAUUUUUUAAUUGAC - 22
Stem-loop(if miRNA) --U   G                     AUGU  A   G   AAC
   GAU AGAAAAUCAAUGGUUGAUAUU    GC CAU CAU   A
   ||| |||||||||||||||||||||    || ||| |||
   UUA UUUUUUAGUUACCAACUAUAA    CG GUA GUA   A
CAG   A                     -GGU  -   G   AUA
Stem-loop sequence UGAUGAGAAAAUCAAUGGUUGAUAUUAUGUGCACAUGCAUAACAAAUAAUGGAUGGCUGGAAUAUCAACCAUUGAUUUUUUAAUUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539131.2
ncRNA:22   CAGUUAAUUUUUUAGUUACCAA   1
  **||||*||||||||||*||||
targets:416   ACCAAUAAAAAAAUCAAGGGUU   437

2.5 PREDICTED: Glycine max dehydration-responsive element-binding protein 1F-like (LOC100793751), mRNA dehydration-responsive element-binding protein 1F-like(LOC100793751) coding protein psRNATarget
XM_003536474.3
ncRNA:22   CAGUUAAUUUUUUAGUUACCAA   1
  **||=||=|||||||||||||*
targets:4988   AGCAGUUGAAAAAUCAAUGGUG   5009

3.0 PREDICTED: Glycine max uncharacterized LOC100500394 (LOC100500394), transcript variant X1, mRNA uncharacterized LOC100500394(LOC100500394) coding protein psRNATarget
XM_006589107.2
ncRNA:22   CAGUUAAUUUUUUAGUUACCAA   1
  ||=*||*|=|||||||||||||
targets:926   GUUUAUAAGAAAAUCAAUGGUU   947

3.0 PREDICTED: Glycine max uncharacterized LOC102666355 (LOC102666355), transcript variant X2, mRNA uncharacterized LOC102666355(LOC102666355) coding protein psRNATarget
XM_006589106.2
ncRNA:22   CAGUUAAUUUUUUAGUUACCAA   1
  ||=*||*|=|||||||||||||
targets:939   GUUUAUAAGAAAAUCAAUGGUU   960

3.0 PREDICTED: Glycine max uncharacterized LOC102666355 (LOC102666355), transcript variant X1, mRNA uncharacterized LOC102666355(LOC102666355) coding protein psRNATarget