Search result

BaseInfo

ncRNA ID	novel_gma_miR721
Species	Glycine max
Class	miRNA
Genome position	Chr15:19841348-19841464 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451634
Length	19
Mature sequence(if miRNA)	1 - UUGCGGAUCAACUUGAUUC - 19
Stem-loop(if miRNA)	--                               G    A             A    A   AUCAAGUUGAUCCGCAAGUUGAUUUUUGAGA UUAC GAUCAAGUUGAUC GUAA A   ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||| G   UAGUUCAACUAGGCGUUCAACUAAAAAUUCU AAUG CUAGUUCAACUAG UAUU A CU                               G    C             G    C
Stem-loop sequence	AUCAAGUUGAUCCGCAAGUUGAUUUUUGAGAGUUACAGAUCAAGUUGAUCAGUAAAAGACUUAUGGAUCAACUUGAUCCGUAAGUCUUAAAAAUCAACUUGCGGAUCAACUUGAUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547498.3	ncRNA:19   CUUAGUUCAACUAGGCGUU   1   |=||||||||||||||||| targets:55   GGAUCAAGUUGAUCCGCAA   73 Target Full Sequence	1.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:19   CUUAGUUCAACUAGGCGUU   1   |=||||||||||||||||| targets:570   GGAUCAAGUUGAUCCGCAA   588 Target Full Sequence	1.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:19   CUUAGUUCAACUAGGCGUU   1   |=||||||||||||||||| targets:650   GGAUCAAGUUGAUCCGCAA   668 Target Full Sequence	1.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_006600975.2	ncRNA:19   CUUAGUUCAACUAGGCGUU   1   |||||||||||||||*||| targets:1163   GAAUCAAGUUGAUCCACAA   1181 Target Full Sequence	1.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_003524153.3	ncRNA:19   CUUAGUUCAACUAGGCGUU   1   |=||||||||||||||=|| targets:237   GGAUCAAGUUGAUCCGUAA   255 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA	uncharacterized LOC100805437(LOC100805437)	coding protein	psRNATarget