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BaseInfo

ncRNA ID novel_gma_miR720
Species Glycine max
Class miRNA
Genome position Chr8:43255840-43255933 [-]
Reference genome Glycine_max_v2.0
Source SRR1294478;SRR2045230;SRR1295522
Length 21
Mature sequence(if miRNA) 1 - AAUUGGAAAAAGUGAGGCACG - 21
Stem-loop(if miRNA) --        A                    U  GU  -  A    UU
  UGCUUCAC UUUUUUCAAUUCAAUUUUUU UA  UG AA CUUA  U
  |||||||| |||||||||||||||||||| ||  || || ||||
  ACGGAGUG AAAAAGGUUAAGUUAAAGAG AU  AC UU GAAU  U
GC        -                    U  UG  C  A    CU
Stem-loop sequence UGCUUCACAUUUUUUCAAUUCAAUUUUUUUUAGUUGAAACUUAUUUUUCUAAGAUUCCAGUUAUGAGAAAUUGAAUUGGAAAAAGUGAGGCACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003541526.3
ncRNA:21   GCACGGAGUGAAAAAGGUUAA   1
  |*|*||||*||||||||||||
targets:102   CCUACCUCUCUUUUUCCAAUU   122

2.5 PREDICTED: Glycine max myosin IB heavy chain (LOC100818959), mRNA myosin IB heavy chain(LOC100818959) coding protein psRNATarget
XM_003530961.3
ncRNA:21   GCACGGAGUGAAAAAGGUUAA   1
  |*||==||||||||||||||*
targets:85   CUUGUUUCACUUUUUCCAAUC   105

3.0 PREDICTED: Glycine max heat shock 70 kDa protein, mitochondrial-like (LOC100811003), mRNA heat shock 70 kDa protein, mitochondrial-like(LOC100811003) coding protein psRNATarget