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BaseInfo

ncRNA ID novel_gma_miR718
Species Glycine max
Class miRNA
Genome position Chr15:522618-522678 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634
Length 24
Mature sequence(if miRNA) 38 - AAGAACACUUCUUCCGGAAAUCCC - 61
Stem-loop(if miRNA) --AC                         A
    UUUCCGGAAGAAGUGUUCUUCCGGA U
    ||||||||||||||||||||||||| A
    AAAGGCCUUCUUCACAAGAAGGCCU A
CCCU                         U
Stem-loop sequence ACUUUCCGGAAGAAGUGUUCUUCCGGAAUAAUUCCGGAAGAACACUUCUUCCGGAAAUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772428.1
ncRNA:24   CC--CUAAAGGCCUUCUUCACAAGAA   1
  ||--||*||||||||||||*||||||
targets:190   GGAAGAAUUCCGGAAGAAGGGUUCUU   215

1.5 PREDICTED: Glycine max uncharacterized LOC102661169 (LOC102661169), mRNA uncharacterized LOC102661169(LOC102661169) coding protein psRNATarget
XM_014772428.1
ncRNA:24   CCCUA---AAGGCCUUCUUCACAAGAA   1
  *|||*---|||||||||||||||||||
targets:80   CGGAAAAAUUCCGGAAGAAGUGUUCUU   106

3.0 PREDICTED: Glycine max uncharacterized LOC102661169 (LOC102661169), mRNA uncharacterized LOC102661169(LOC102661169) coding protein psRNATarget
XM_014772428.1
ncRNA:24   CCCUAAAGGCCUUCUUCA-CAAGAA   1
  ***=||||||||||||||-||||||
targets:163   AAAGUUUCCGGAAGAAGUAGUUCUU   187

3.0 PREDICTED: Glycine max uncharacterized LOC102661169 (LOC102661169), mRNA uncharacterized LOC102661169(LOC102661169) coding protein psRNATarget