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BaseInfo

ncRNA ID novel_gma_miR711
Species Glycine max
Class miRNA
Genome position Chr14:9260349-9260454 [+]
Reference genome Glycine_max_v2.0
Source SRR1451634
Length 22
Mature sequence(if miRNA) 85 - AGAAUCAUGAUUUCCAGGCAUG - 106
Stem-loop(if miRNA) --      -       A    C  CU   C       ---C   GAUCAAUCUAA
  UGCUUG AAAUCAU AUUC UG  AAU AUGUUUC    GAU           C
  |||||| ||||||| |||| ||  ||| |||||||    |||
  ACGGAC UUUAGUA UAAG AC  UUA UACAAAG    CUU           G
GU      C       C    A  UC   A       AACU   UCUCAUUUUAA
Stem-loop sequence UGCUUGAAAUCAUAAUUCCUGCUAAUCAUGUUUCCGAUGAUCAAUCUAACGAAUUUUACUCUUUCUCAAGAAACAUAAUUCUCAAGAAUCAUGAUUUCCAGGCAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003522362.3
ncRNA:22   GUACGGACCUUUAGUACUAAGA   1
  ||*|||||||||||||||||=|
targets:1697   CAAGCCUGGAAAUCAUGAUUUU   1718

1.5 PREDICTED: Glycine max probable galactinol--sucrose galactosyltransferase 2 (LOC100816978), transcript variant X1, mRNA probable galactinol--sucrose galactosyltransferase 2(LOC100816978) coding protein psRNATarget
XM_003524080.3
ncRNA:22   GUACGGACCUUUAGUACUAAGA   1
  *=|*|||||||||||||||||*
targets:1353   AGUUCCUGGAAAUCAUGAUUCA   1374

2.0 PREDICTED: Glycine max GATA transcription factor 26-like (LOC100799745), mRNA GATA transcription factor 26-like(LOC100799745) coding protein psRNATarget