ncRNA ID | novel_gma_miR700 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:35279081-35279173 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478 |
Length | 23 |
Mature sequence(if miRNA) | 71 - GAUUGAUUUUACUUUGAGAGAAG - 93 |
Stem-loop(if miRNA) |
--    C  U   C         CU       C    C         A   UCUC CG AAG UAAAAUCAA  UAUGCAC UUAA UUUUAUAGA G   |||| || ||| |||||||||  ||||||| |||| |||||||||   AGAG GU UUC AUUUUAGUU  GUACGUG AAUU AGAAUAUCU C GA    A  -   -         AG       -    A         U |
Stem-loop sequence | UCUCCCGUAAGCUAAAAUCAACUUAUGCACCUUAACUUUUAUAGAAGCUUCUAUAAGAAUUAAGUGCAUGGAUUGAUUUUACUUUGAGAGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516913.3 |
|
2.5 | PREDICTED: Glycine max trihelix transcription factor GT-3b-like (LOC100791013), mRNA | trihelix transcription factor GT-3b-like(LOC100791013) | coding protein | psRNATarget | |||||||||
AK246046.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-49-M14 | NA | coding protein | psRNATarget | |||||||||
XM_014766225.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102661012 (LOC102661012), mRNA | uncharacterized LOC102661012(LOC102661012) | coding protein | psRNATarget |