Search result

BaseInfo

ncRNA ID novel_gma_miR685
Species Glycine max
Class miRNA
Genome position Chr7:15159666-15159728 [-]
Reference genome Glycine_max_v2.0
Source SRR1451633;SRR1451636;SRR1451641;SRR1451646;SRR1451626
Length 24
Mature sequence(if miRNA) 1 - UUUAACAUCGGUUAUUUGAAAACU - 24
Stem-loop(if miRNA) --                      -----    A
  UUUUCAAAUAACCGAUGUUAAA     ACUG A
  ||||||||||||||||||||||     ||||
  AAAAGUUUAUUGGCUACAAUUU     UGAU U
UC                      UAGUG    U
Stem-loop sequence UUUUCAAAUAACCGAUGUUAAAACUGAAUUUAGUGUGAUUUUAACAUCGGUUAUUUGAAAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1
  |||||||||||||||*|||||||*
targets:1638   AGUUUUCAAAUAACCAAUGUUAAC   1661

2.5 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget
LQ242673.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1
  =*||||=||||||||*||||||||
targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1
  =*||||=||||||||*||||||||
targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
JB171004.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1
  =*||||=||||||||*||||||||
targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget