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BaseInfo

ncRNA ID	novel_gma_miR683
Species	Glycine max
Class	miRNA
Genome position	Chr7:24858412-24858548 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451633
Length	21
Mature sequence(if miRNA)	117 - CUGAAAAACCGUCUUAAAAAG - 137
Stem-loop(if miRNA)	-CUG     C             UUAU          UG       -       A            UG     AAAAA CGUCUUAAAAAGU    CCUUUUAAGA  AUUUUUA CUUAAGA UCGUCUUAGAAA  U     ||||| |||||||||||||    ||||||||||  ||||||| ||||||| ||||||||||||     UUUUU GCAGAAUUUUUUA    GGAAAAUUCU  UAAAAAU GAAUUUU GGCAGAAUCUUU  C GGUA     A             CCAU          GU       C       -            CU
Stem-loop sequence	CUGAAAAACCGUCUUAAAAAGUUUAUCCUUUUAAGAUGAUUUUUACUUAAGAAUCGUCUUAGAAAUGUCUCUUUCUAAGACGGUUUUAAGCUAAAAAUUGUCUUAAAAGGUACCAUUUUUUAAGACGAUUUUUAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006573775.2	ncRNA:21   GAAAAAUUCUGCCAAAAAGUC   1   **||*|||||=|||||||||| targets:2037   GAUUCUAAGAUGGUUUUUCAG   2057 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like (LOC100799638), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like(LOC100799638)	coding protein	psRNATarget
XM_006573776.2	ncRNA:21   GAAAAAUUCUGCCAAAAAGUC   1   **||*|||||=|||||||||| targets:2076   GAUUCUAAGAUGGUUUUUCAG   2096 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like (LOC100799638), transcript variant X4, mRNA	pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like(LOC100799638)	coding protein	psRNATarget
XM_006573774.2	ncRNA:21   GAAAAAUUCUGCCAAAAAGUC   1   **||*|||||=|||||||||| targets:2167   GAUUCUAAGAUGGUUUUUCAG   2187 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like (LOC100799638), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like(LOC100799638)	coding protein	psRNATarget