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BaseInfo

ncRNA ID novel_gma_miR681
Species Glycine max
Class miRNA
Genome position Chr11:25584099-25584148 [+]
Reference genome Glycine_max_v2.0
Source SRR1451633;SRR1451635;SRR1451644;SRR1451645;SRR1451646;SRR1451655
Length 24
Mature sequence(if miRNA) 27 - AAUAACCGUCUUUGAUUGUAAAGU - 50
Stem-loop(if miRNA) --ACA   U               A
     GCA UCAAAGACGGUUAUU G
     ||| |||||||||||||||
     UGU AGUUUCUGCCAAUAA C
UGAAA   U               A
Stem-loop sequence ACAGCAUUCAAAGACGGUUAUUAGCAAAUAACCGUCUUUGAUUGUAAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   UGAAAUGUUAGUUUCUGCCAAUAA   1
  ||*|*|||*|||||||||||||||
targets:1483   ACAUAACAUUCAAAGACGGUUAUU   1506

1.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UGAAAUGUUAGUUUCUGCCAAUAA   1
  |****|||*|||||||||||||||
targets:1538   AAGCAACAUUCAAAGACGGUUAUU   1561

1.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UGAAAUGUUAGUUUCUGCCAAUAA   1
  ||*|*|||*||||||=||||||||
targets:1593   ACAUAACAUUCAAAGGCGGUUAUU   1616

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget