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BaseInfo

ncRNA ID novel_gma_miR676
Species Glycine max
Class miRNA
Genome position Chr6:14516727-14516797 [-]
Reference genome Glycine_max_v2.0
Source SRR1451633;SRR1451645;SRR1451647
Length 20
Mature sequence(if miRNA) 52 - UUUUCCUAUACUUAUCUCAG - 71
Stem-loop(if miRNA) --       -    -  A    -   UAUAUCU   GC
  UUUUCCU AUAC UU UCUC AGA       GCU  A
  ||||||| |||| || |||| |||       |||
  AGGAGGA UAUG AA AGAG UCU       CGG  C
UA       A    U  C    A   --CUUUC   AU
Stem-loop sequence UUUUCCUAUACUUAUCUCAGAUAUAUCUGCUGCACUAGGCCUUUCUCUAGAGACAAUGUAUAAGGAGGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003525836.3
ncRNA:20   GACUCUAUUCAUAUCCUUUU   1
  *||||||||*||||||||||
targets:1405   AUGAGAUAACUAUAGGAAAA   1424

1.5 PREDICTED: Glycine max transcription factor bHLH18-like (LOC100798011), mRNA transcription factor bHLH18-like(LOC100798011) coding protein psRNATarget
XM_006604000.2
ncRNA:20   GACUCUAUUCAUAUCCUUUU   1
  *|*|||*|||||||||||||
targets:3497   AUAAGAGAAGUAUAGGAAAA   3516

2.0 PREDICTED: Glycine max histone-lysine N-methyltransferase ATX5-like (LOC100775276), transcript variant X2, mRNA histone-lysine N-methyltransferase ATX5-like(LOC100775276) coding protein psRNATarget
XM_006604003.2
ncRNA:20   GACUCUAUUCAUAUCCUUUU   1
  *|*|||*|||||||||||||
targets:3503   AUAAGAGAAGUAUAGGAAAA   3522

2.0 PREDICTED: Glycine max histone-lysine N-methyltransferase ATX5-like (LOC100775276), transcript variant X5, mRNA histone-lysine N-methyltransferase ATX5-like(LOC100775276) coding protein psRNATarget
XM_006604002.2
ncRNA:20   GACUCUAUUCAUAUCCUUUU   1
  *|*|||*|||||||||||||
targets:3573   AUAAGAGAAGUAUAGGAAAA   3592

2.0 PREDICTED: Glycine max histone-lysine N-methyltransferase ATX5-like (LOC100775276), transcript variant X4, mRNA histone-lysine N-methyltransferase ATX5-like(LOC100775276) coding protein psRNATarget
XM_006604001.2
ncRNA:20   GACUCUAUUCAUAUCCUUUU   1
  *|*|||*|||||||||||||
targets:3624   AUAAGAGAAGUAUAGGAAAA   3643

2.0 PREDICTED: Glycine max histone-lysine N-methyltransferase ATX5-like (LOC100775276), transcript variant X3, mRNA histone-lysine N-methyltransferase ATX5-like(LOC100775276) coding protein psRNATarget
XM_003555038.3
ncRNA:20   GACUCUAUUCAUAUCCUUUU   1
  *|*|||*|||||||||||||
targets:3708   AUAAGAGAAGUAUAGGAAAA   3727

2.0 PREDICTED: Glycine max histone-lysine N-methyltransferase ATX5-like (LOC100775276), transcript variant X1, mRNA histone-lysine N-methyltransferase ATX5-like(LOC100775276) coding protein psRNATarget