ncRNA ID | novel_gma_miR670 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:33037262-33037360 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451633 |
Length | 21 |
Mature sequence(if miRNA) | 79 - AUGAAUGGUGAGGAUGAGAAG - 99 |
Stem-loop(if miRNA) |
--C                    U            ----- A      AUU    CUCAUCUUCAUCAUUCAUUU CUUGGAAUCUAA     C GAUAAG   A    |||||||||||||||||||| ||||||||||||     | ||||||    GAGUAGGAGUGGUAAGUAAA GAACUUUAGAUU     G UUAUUC   A GAA                    U            ACCAA A      AGU |
Stem-loop sequence | CCUCAUCUUCAUCAUUCAUUUUCUUGGAAUCUAACAGAUAAGAUUAAUGACUUAUUAGAACCAUUAGAUUUCAAGUAAAUGAAUGGUGAGGAUGAGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006590343.2 |
|
2.5 | PREDICTED: Glycine max protein NETWORKED 1A-like (LOC100800597), transcript variant X2, mRNA | protein NETWORKED 1A-like(LOC100800597) | coding protein | psRNATarget | |||||||||
XM_014762910.1 |
|
2.5 | PREDICTED: Glycine max BTB/POZ and MATH domain-containing protein 2-like (LOC100811065), transcript variant X1, mRNA | BTB/POZ and MATH domain-containing protein 2-like(LOC100811065) | coding protein | psRNATarget | |||||||||
BT094715.1 |
|
2.5 | Soybean clone JCVI-FLGm-6E3 unknown mRNA | NA | coding protein | psRNATarget |