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BaseInfo

ncRNA ID novel_gma_miR667
Species Glycine max
Class miRNA
Genome position Chr2:36963615-36963691 [-]
Reference genome Glycine_max_v2.0
Source SRR1451633
Length 24
Mature sequence(if miRNA) 1 - UUUGUUAACAUUGAUUUUACGUAA - 24
Stem-loop(if miRNA) --        C    U        CU   AUUAUUUAC
  ACGUAAAA CAAU UUAACAAA  CGC         G
  |||||||| |||| ||||||||  |||         A
  UGCAUUUU GUUA AAUUGUUU  GCG         G
AA        A    C        UU   CCACUGUUA
Stem-loop sequence ACGUAAAACCAAUUUUAACAAACUCGCAUUAUUUACGAGAUUGUCACCGCGUUUUUGUUAACAUUGAUUUUACGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006597933.2
ncRNA:24   AAUGCAUUUUAGUUACAAUUGUUU   1
  |*|=||*|*|||||||||||||||
targets:2309   UAAUGUCAUAUCAAUGUUAACAAA   2332

2.0 PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 (LOC100820258), mRNA G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520(LOC100820258) coding protein psRNATarget
XM_006604593.2
ncRNA:24   AAUGCAUUUUAGUUACAAUUGUUU   1
  *|||*|||||*||||||||*||||
targets:4680   AUACUUAAAAGCAAUGUUAUCAAA   4703

2.5 PREDICTED: Glycine max trafficking protein particle complex subunit 8-like (LOC100813062), mRNA trafficking protein particle complex subunit 8-like(LOC100813062) coding protein psRNATarget