ncRNA ID | bra-miR167a |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA3:19161779-19161912 [+] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 18 - UGAAGCUGCCAGCAUGAUCUA - 38 |
Stem-loop(if miRNA) |
     AC   -  U U A         C             UA  -     UU ---         UA GGUGC  CGG CA C G UGAAGCUGC AGCAUGAUCUAGU  AC UUUAU  C   UCCGUUGUU  U |||||  ||| || | | ||||||||| |||||||||||||  || |||||  |   |||||||||  C CUACG  GUC GU G C ACUUUGAUG UUGUACUAGAUUA  UG GAAUA  G   AGGUAACAG  C      CU   A  U C C         C             GC  U     GG AAA         UA |
Stem-loop sequence | GGUGCACCGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAGUUAACUUUAUUUCUCCGUUGUUUAUCCAUGACAAUGGAAAAGGGAUAAGUGUCGAUUAGAUCAUGUUCGUAGUUUCACCCGUUGACUGUCGCAUC |
1 | PMID:18558089
"Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica"; He XF, Fang YY, Feng L, Guo HS; FEBS Lett. 582:2445-2452(2008). |