ncRNA ID | novel_gma_miR664 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:42058758-42058969 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478 |
Length | 25 |
Mature sequence(if miRNA) | 1 - ACAUCACUUGUUAACGGUCAACAUC - 25 |
Stem-loop(if miRNA) |
--C   A                                      C                    CG                 UUAAUGAAAACAACA   -  -      C    GUU ACCGUUAACAAGUGAUGUUGACUGUUACGUGUCACGUU UUAUUGGAUGAUGACUGUCA  UGUUAUGUUCUGAUUGG               AUG CA UUUCAU U    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||               ||| || |||||| U    CAA UGGCAAUUGUUCACUACAACUGACGGUGCACAGUGCAA AAUAACUUACUACUGACAGU  ACAGUACAAGACUAACC               UAC GU GAGGUA U CUA   C                                      A                    UG                 ---------------   A  U      C |
Stem-loop sequence | CGUUAACCGUUAACAAGUGAUGUUGACUGUUACGUGUCACGUUCUUAUUGGAUGAUGACUGUCACGUGUUAUGUUCUGAUUGGUUAAUGAAAACAACAAUGCAUUUCAUCUUUCAUGGAGUUGACAUCCAAUCAGAACAUGACAGUUGACAGUCAUCAUUCAAUAAAAACGUGACACGUGGCAGUCAACAUCACUUGUUAACGGUCAACAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602607.2 |
|
1.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget |