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BaseInfo

ncRNA ID novel_gma_miR664
Species Glycine max
Class miRNA
Genome position Chr6:42058758-42058969 [-]
Reference genome Glycine_max_v2.0
Source SRR1294478
Length 25
Mature sequence(if miRNA) 1 - ACAUCACUUGUUAACGGUCAACAUC - 25
Stem-loop(if miRNA) --C   A                                      C                    CG                 UUAAUGAAAACAACA   -  -      C
   GUU ACCGUUAACAAGUGAUGUUGACUGUUACGUGUCACGUU UUAUUGGAUGAUGACUGUCA  UGUUAUGUUCUGAUUGG               AUG CA UUUCAU U
   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||               ||| || |||||| U
   CAA UGGCAAUUGUUCACUACAACUGACGGUGCACAGUGCAA AAUAACUUACUACUGACAGU  ACAGUACAAGACUAACC               UAC GU GAGGUA U
CUA   C                                      A                    UG                 ---------------   A  U      C
Stem-loop sequence CGUUAACCGUUAACAAGUGAUGUUGACUGUUACGUGUCACGUUCUUAUUGGAUGAUGACUGUCACGUGUUAUGUUCUGAUUGGUUAAUGAAAACAACAAUGCAUUUCAUCUUUCAUGGAGUUGACAUCCAAUCAGAACAUGACAGUUGACAGUCAUCAUUCAAUAAAAACGUGACACGUGGCAGUCAACAUCACUUGUUAACGGUCAACAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602607.2
ncRNA:25   CUACAACUGGCAAUUGUUCACUACA   1
  ||*|||||||||||=||||||||||
targets:507   GACGUUGACCGUUAGCAAGUGAUGU   531

1.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget