ncRNA ID | novel_gma_miR661 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:13546503-13546647 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451633 |
Length | 24 |
Mature sequence(if miRNA) | 122 - UUUUCUAAGACGGUUAUUACUGAU - 145 |
Stem-loop(if miRNA) |
--                       CAAUG                 ---AAA                U GUA   UAGUAAUAAUCGUCUUAGAAAGU     UUUUAAGACGGUUAUUA      AACCGUUUUAAAAAGU U   A   |||||||||||||||||||||||     |||||||||||||||||      |||||||||||||||| |   GUCAUUAUUGGCAGAAUCUUUUA     AAAAUUCUGCUAAUAGU      UUGGUAGAAUUUUUCA A   U UA                       UAUAA                 GAUUUA                C AAG |
Stem-loop sequence | UAGUAAUAAUCGUCUUAGAAAGUCAAUGUUUUAAGACGGUUAUUAAAAAACCGUUUUAAAAAGUUUGUAAUGAAACACUUUUUAAGAUGGUUAUUUAGUGAUAAUCGUCUUAAAAAAUAUAUUUUCUAAGACGGUUAUUACUGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775518.1 |
|
3.0 | PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA | methylsterol monooxygenase 1-1-like(LOC100802435) | coding protein | psRNATarget |