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BaseInfo

ncRNA ID novel_gma_miR661
Species Glycine max
Class miRNA
Genome position Chr20:13546503-13546647 [+]
Reference genome Glycine_max_v2.0
Source SRR1451633
Length 24
Mature sequence(if miRNA) 122 - UUUUCUAAGACGGUUAUUACUGAU - 145
Stem-loop(if miRNA) --                       CAAUG                 ---AAA                U GUA
  UAGUAAUAAUCGUCUUAGAAAGU     UUUUAAGACGGUUAUUA      AACCGUUUUAAAAAGU U   A
  |||||||||||||||||||||||     |||||||||||||||||      |||||||||||||||| |
  GUCAUUAUUGGCAGAAUCUUUUA     AAAAUUCUGCUAAUAGU      UUGGUAGAAUUUUUCA A   U
UA                       UAUAA                 GAUUUA                C AAG
Stem-loop sequence UAGUAAUAAUCGUCUUAGAAAGUCAAUGUUUUAAGACGGUUAUUAAAAAACCGUUUUAAAAAGUUUGUAAUGAAACACUUUUUAAGAUGGUUAUUUAGUGAUAAUCGUCUUAAAAAAUAUAUUUUCUAAGACGGUUAUUACUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775518.1
ncRNA:24   UAGUCA-UUAUUGGCAGAAUCUUUU   1
  ||=|*|-|||||||||||||||||=
targets:734   AUUAUUGAAUAACCGUCUUAGAAAG   758

3.0 PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA methylsterol monooxygenase 1-1-like(LOC100802435) coding protein psRNATarget