ncRNA ID | bra-miR9567-3p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA3:17824435-17824572 [+] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 106 - AAACUAUAUGUGUUGCUUAGA - 126 |
Stem-loop(if miRNA) |
AUU              A                         UA                 --A  AA    AGUUACGCAUCUAA CAACACAUAUAGUUUGCAGGGUGGA  AAACUGGCAUUAUAUGU   AC  G    |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||   ||    UCAAUGCGUAGAUU GUUGUGUAUAUCAAACGUCCCACCU  UUUGAUCGUAAUAUACA   UG  A GGU              C                         UG                 AGA  GC |
Stem-loop sequence | AUUAGUUACGCAUCUAAACAACACAUAUAGUUUGCAGGGUGGAUAAAACUGGCAUUAUAUGUAACAAGACGGUAGAACAUAUAAUGCUAGUUUGUUCCACCCUGCAAACUAUAUGUGUUGCUUAGAUGCGUAACUUGG |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |