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BaseInfo

ncRNA ID ahy-miR3513-5p
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UUAAUUUCUGAGUUUGUCAUC - NA
Stem-loop(if miRNA) UAUUGUCUAAUU       -    ---         AG       UCU     UCUGUUGAU    --U  UAA
            GUAAUGG AUUU   UAAUUUCUG  UUUGUCA   GAACU         UGUG   UC   A
            ||||||| ||||   |||||||||  |||||||   |||||         ||||   ||   U
            CGUUGCC UAAA   GUUAAAGAU  GAAUAGU   UUUGG         ACAU   AG   U
-----------U       A    UAU         -A       -UG     UUGUUGUGU    UGU  UCU
Stem-loop sequence UAUUGUCUAAUUGUAAUGGAUUUUAAUUUCUGAGUUUGUCAUCUGAACUUCUGUUGAUUGUGUUCUAAAUUUCUGAUGUUACAUGUGUUGUUGGUUUGUUGAUAAGAUAGAAAUUGUAUAAAUACCGUUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000180.1
ncRNA:21   CUACU-GUUUGAGUCUUUAAUU   1
  *||*|-||||||||||||||||
targets:193   UAUAAUCAAACUCAGAAAUUAA   214

3.0 TSA: Arachis hypogaea Unigene180 mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).