ncRNA ID | novel_gma_miR653 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:10245461-10245598 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451633;SRR1451609 |
Length | 22 |
Mature sequence(if miRNA) | 117 - UUAAAAAGACUCAAUUGGCACG - 138 |
Stem-loop(if miRNA) |
--UA      A       CAAGU        G   U    CG              AAUUUCA              CCAAUU AGUCUUU     UUUCUUUC UUU UAAU  GGUCCUUCCAUCUU       UCUAAUAUCG     |||||| |||||||     |||||||| ||| ||||  ||||||||||||||       |||||||||G     GGUUAA UCAGAAA     AAAGAGAG AAA GUUA  CCAGGAAGGUAGGG       AGGUUGUAGA GCAC      C       AAUUU        A   U    AU              -------          |
Stem-loop sequence | UACCAAUUAAGUCUUUCAAGUUUUCUUUCGUUUUUAAUCGGGUCCUUCCAUCUUAAUUUCAUCUAAUAUCGGAGAUGUUGGAGGGAUGGAAGGACCUAAUUGUAAAAGAGAGAAAUUUAAAAAGACUCAAUUGGCACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003519771.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100797400 (LOC100797400), mRNA | uncharacterized LOC100797400(LOC100797400) | coding protein | psRNATarget |