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BaseInfo

ncRNA ID novel_gma_miR653
Species Glycine max
Class miRNA
Genome position Chr17:10245461-10245598 [+]
Reference genome Glycine_max_v2.0
Source SRR1451633;SRR1451609
Length 22
Mature sequence(if miRNA) 117 - UUAAAAAGACUCAAUUGGCACG - 138
Stem-loop(if miRNA) --UA      A       CAAGU        G   U    CG              AAUUUCA         
    CCAAUU AGUCUUU     UUUCUUUC UUU UAAU  GGUCCUUCCAUCUU       UCUAAUAUCG
    |||||| |||||||     |||||||| ||| ||||  ||||||||||||||       |||||||||G
    GGUUAA UCAGAAA     AAAGAGAG AAA GUUA  CCAGGAAGGUAGGG       AGGUUGUAGA
GCAC      C       AAUUU        A   U    AU              -------         
Stem-loop sequence UACCAAUUAAGUCUUUCAAGUUUUCUUUCGUUUUUAAUCGGGUCCUUCCAUCUUAAUUUCAUCUAAUAUCGGAGAUGUUGGAGGGAUGGAAGGACCUAAUUGUAAAAGAGAGAAAUUUAAAAAGACUCAAUUGGCACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519771.3
ncRNA:22   GCACGGUUAACUCAGAAAAAUU   1
  |||||||*|||||||||||*||
targets:1999   CGUGCCACUUGAGUCUUUUAAA   2020

2.5 PREDICTED: Glycine max uncharacterized LOC100797400 (LOC100797400), mRNA uncharacterized LOC100797400(LOC100797400) coding protein psRNATarget