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BaseInfo

ncRNA ID novel_gma_miR652
Species Glycine max
Class miRNA
Genome position Chr17:771741-771790 [+]
Reference genome Glycine_max_v2.0
Source SRR1451633
Length 24
Mature sequence(if miRNA) 1 - UUUCUGCUCUUGAUGGUUAAGCCU - 24
Stem-loop(if miRNA) -UUUCU   -        UU    CU
      GCU CUUGAUGG  AAGC  U
      ||| ||||||||  ||||
      UGG GAACUGUC  UUUG  G
UCAAAU   U        --    UU
Stem-loop sequence UUUCUGCUCUUGAUGGUUAAGCCUUGUUGUUUCUGUCAAGUGGUUAAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531122.3
ncRNA:24   UCCGAAUUGGUAGUUCUCGUCUUU   1
  ***|||||=|*||||||||||||=
targets:1372   CCUCUUAAUCCUCAAGAGCAGAAG   1395

3.0 PREDICTED: Glycine max auxin response factor 6 (LOC100806203), transcript variant X2, mRNA auxin response factor 6(LOC100806203) coding protein psRNATarget
XM_006585030.2
ncRNA:24   UCCGAAUUGGUAGUUCUCGUCUUU   1
  ***|||||=|*||||||||||||=
targets:1372   CCUCUUAAUCCUCAAGAGCAGAAG   1395

3.0 PREDICTED: Glycine max auxin response factor 6 (LOC100806203), transcript variant X1, mRNA auxin response factor 6(LOC100806203) coding protein psRNATarget