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BaseInfo

ncRNA ID novel_gma_miR650
Species Glycine max
Class miRNA
Genome position Chr1:6666209-6666258 [+]
Reference genome Glycine_max_v2.0
Source SRR1451633;SRR1451634;SRR1451619;SRR1451624
Length 24
Mature sequence(if miRNA) 27 - GAGAACCGUCUUAGAAUGUACAAC - 50
Stem-loop(if miRNA) --A  -               A  U
   GU CAUUCUAAGACGGUU UU U
   || ||||||||||||||| || C
   CA GUAAGAUUCUGCCAA AG C
CAA  U               G  U
Stem-loop sequence AGUCAUUCUAAGACGGUUAUUUUCCUGAGAACCGUCUUAGAAUGUACAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CAACAUGUAAGAUUCUGCCAAGAG   1
  ****||||||||||||||||||||
targets:2604   AAAAUACAUUCUAAGACGGUUCUC   2627

0.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014771087.1
ncRNA:24   CAACAUGUAAGAUUCUGCCAAGAG   1
  *****||||||||||||||||||=
targets:2508   AAAACACAUUCUAAGACGGUUCUU   2531

1.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014763138.1
ncRNA:24   CAACAUGUAAGAUUCUGCCAAGAG   1
  ****||||||||||||=|||||||
targets:1522   UAAAUACAUUCUAAGAUGGUUCUC   1545

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:24   CAACAUGUAAGAUUCUGCCAAGAG   1
  ****||||||||||||=|||||||
targets:2231   UAAAUACAUUCUAAGAUGGUUCUC   2254

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_014773514.1
ncRNA:24   CAACAUGUAAGAUUCUGCCAAGAG   1
  |****||||||||||||||||*|=
targets:263   GACACACAUUCUAAGACGGUUAUU   286

2.5 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget