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BaseInfo

ncRNA ID novel_gma_miR648
Species Glycine max
Class miRNA
Genome position Chr16:9440355-9440417 [-]
Reference genome Glycine_max_v2.0
Source SRR1451633
Length 24
Mature sequence(if miRNA) 1 - UUUAACAUCGGUUAUUUGAAAACU - 24
Stem-loop(if miRNA) --C         C           -----    A
   UUUCAAAUA CUGAUGUUAAA     ACUG A
   ||||||||| |||||||||||     ||||
   AAAGUUUAU GGCUACAAUUU     UGAU U
UCA         U           UAGUG    U
Stem-loop sequence CUUUCAAAUACCUGAUGUUAAAACUGAAUUUAGUGUGAUUUUAACAUCGGUUAUUUGAAAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1
  |||||||||||||||*|||||||*
targets:1638   AGUUUUCAAAUAACCAAUGUUAAC   1661

2.5 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget
LQ242673.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1
  =*||||=||||||||*||||||||
targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1
  =*||||=||||||||*||||||||
targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
JB171004.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUU   1
  =*||||=||||||||*||||||||
targets:171   GUUUUUUAAAUAACCAAUGUUAAA   194

2.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget