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BaseInfo

ncRNA ID	bra-miR9567-5p
Species	Brassica rapa
Class	miRNA
Genome position	chrA3:17824435-17824572 [+]
Reference genome	Brapa_1.1
Source	miRBase
Length	21
Mature sequence(if miRNA)	15 - UAAACAACACAUAUAGUUUGC - 35
Stem-loop(if miRNA)	AUU              A                         UA                 --A  AA    AGUUACGCAUCUAA CAACACAUAUAGUUUGCAGGGUGGA  AAACUGGCAUUAUAUGU   AC  G    |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||   ||    UCAAUGCGUAGAUU GUUGUGUAUAUCAAACGUCCCACCU  UUUGAUCGUAAUAUACA   UG  A GGU              C                         UG                 AGA  GC
Stem-loop sequence	AUUAGUUACGCAUCUAAACAACACAUAUAGUUUGCAGGGUGGAUAAAACUGGCAUUAUAUGUAACAAGACGGUAGAACAUAUAAUGCUAGUUUGUUCCACCCUGCAAACUAUAUGUGUUGCUUAGAUGCGUAACUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009116501.2	ncRNA:21   CGUUUGAUAUACACAACAAAU   1   *||||||*||||||||||||* targets:2005   ACAAACUUUAUGUGUUGUUUU   2025 Target Full Sequence	2.0	PREDICTED: Brassica rapa pumilio homolog 9-like (LOC103840015), mRNA	pumilio homolog 9-like(LOC103840015)	coding protein	psRNATarget
XM_009131129.2	ncRNA:21   CGUUUGAUAUACACAACAAAU   1   *|||=|||||||||||||*|| targets:4487   UCAAGCUAUAUGUGUUGUAUA   4507 Target Full Sequence	2.5	PREDICTED: Brassica rapa uncharacterized LOC103854199 (LOC103854199), mRNA	uncharacterized LOC103854199(LOC103854199)	coding protein	psRNATarget

Reference

1	PMID:24559317 "Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014).