ncRNA ID | novel_gma_miR639 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:40388135-40388249 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451633;SRR1451635;SRR1451638;SRR1451658;SRR1451619;SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 92 - UUUGUAGAAACAAUUUGGUUAACC - 115 |
Stem-loop(if miRNA) |
--         A      G          AUAAAAAAAA      --A              U   UUUGUAGAA CAAUUU GUUAACCAGA          UAUUUC   AAAAACUAGUUUGG U   ||||||||| |||||| ||||||||||          ||||||   ||||||||||||||   AGAUGUUUU GUUAGA CAAUUGGUUU          AUAAAG   UUUUUGGUCAAGCU A AA         G      G          ---------A      AUG              A |
Stem-loop sequence | UUUGUAGAAACAAUUUGGUUAACCAGAAUAAAAAAAAUAUUUCAAAAAACUAGUUUGGUUAAUCGAACUGGUUUUUGUAGAAAUAAUUUGGUUAACGAGAUUGGUUUUGUAGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK286931.1 |
|
1.5 | Glycine max cDNA, clone: GMFL01-40-H11 | NA | coding protein | psRNATarget | |||||||||
XM_003539938.3 |
|
1.5 | PREDICTED: Glycine max RNA polymerase sigma factor sigA (LOC100801884), mRNA | RNA polymerase sigma factor sigA(LOC100801884) | coding protein | psRNATarget |