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BaseInfo

ncRNA ID novel_gma_miR639
Species Glycine max
Class miRNA
Genome position Chr14:40388135-40388249 [-]
Reference genome Glycine_max_v2.0
Source SRR1451633;SRR1451635;SRR1451638;SRR1451658;SRR1451619;SRR1451626
Length 24
Mature sequence(if miRNA) 92 - UUUGUAGAAACAAUUUGGUUAACC - 115
Stem-loop(if miRNA) --         A      G          AUAAAAAAAA      --A              U
  UUUGUAGAA CAAUUU GUUAACCAGA          UAUUUC   AAAAACUAGUUUGG U
  ||||||||| |||||| ||||||||||          ||||||   ||||||||||||||
  AGAUGUUUU GUUAGA CAAUUGGUUU          AUAAAG   UUUUUGGUCAAGCU A
AA         G      G          ---------A      AUG              A
Stem-loop sequence UUUGUAGAAACAAUUUGGUUAACCAGAAUAAAAAAAAUAUUUCAAAAAACUAGUUUGGUUAAUCGAACUGGUUUUUGUAGAAAUAAUUUGGUUAACGAGAUUGGUUUUGUAGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK286931.1
ncRNA:24   CCAAUUGGUUUAACAAAGAUGUUU   1
  *****|||||||||||*|||||||
targets:404   ACACUACCAAAUUGUUCCUACAAA   427

1.5 Glycine max cDNA, clone: GMFL01-40-H11 NA coding protein psRNATarget
XM_003539938.3
ncRNA:24   CCAAUUGGUUUAACAAAGAUGUUU   1
  *****|||||||||||*|||||||
targets:441   ACACUACCAAAUUGUUCCUACAAA   464

1.5 PREDICTED: Glycine max RNA polymerase sigma factor sigA (LOC100801884), mRNA RNA polymerase sigma factor sigA(LOC100801884) coding protein psRNATarget