ncRNA ID | novel_gma_miR637 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:20189048-20189201 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451633;SRR1451637;SRR1451639;SRR1451642;SRR1451654;SRR1295525;SRR1295527;SRR1292928;SRR1451606;SRR1292929;SRR1451615;SRR1451617;SRR1451620;SRR1451621;SRR1451626 |
Length | 24 |
Mature sequence(if miRNA) | 131 - AUGUAGACAUUCUAAGACGGUUCU - 154 |
Stem-loop(if miRNA) |
--               C     A         UUUUUUU            C       A   ------   U      ACA   AACCGUCUUAGAAUG CUACA UCUAAGAUG       UUUUUCAAAGAA CGUCUUA AAU      AUU UUUUAA   A   ||||||||||||||| ||||| |||||||||       |||||||||||| ||||||| |||      ||| ||||||   UUGGCAGAAUCUUAC GAUGU AGAUUUUGC       AAAAAGUUUUUU GCAGAAU UUA      UAA AAAAUU   A UC               A     A         ------U            A       C   GAAGUU   U      AAA |
Stem-loop sequence | AACCGUCUUAGAAUGCCUACAAUCUAAGAUGUUUUUUUUUUUUCAAAGAACCGUCUUAAAAUAUUUUUUUAAACAAAAAAUUAAAAUAAUUUGAAGAUUCUAAGACGAUUUUUUGAAAAAUCGUUUUAGAAUGUAGACAUUCUAAGACGGUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014763138.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA | uncharacterized LOC100806242(LOC100806242) | coding protein | psRNATarget | |||||||||
XM_006589010.2 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA | uncharacterized LOC100806242(LOC100806242) | coding protein | psRNATarget |