ncRNA ID | novel_gma_miR633 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:34770833-34770961 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451633;SRR1451652 |
Length | 21 |
Mature sequence(if miRNA) | 109 - UAAGAACCGUCUUAGAAAGGA - 129 |
Stem-loop(if miRNA) |
--               G            C          GU      --       C    CCCU   UUUUCUAAGACGGUU UUAGCUAAGACC GUCUUAGAAA  GGACAU  UCUAAGA GGUU    U   ||||||||||||||| |||||||||||| ||||||||||  ||||||  ||||||| ||||   GAAAGAUUCUGCCAA AAUCGAUUCUGG CAGAAUCUUU  UCUGUG  AGAUUCU CCAA    C AG               G            -          --      AA       A    CAAU |
Stem-loop sequence | UUUUCUAAGACGGUUGUUAGCUAAGACCCGUCUUAGAAAGUGGACAUUCUAAGACGGUUCCCUUCUAACAACCAUCUUAGAAAGUGUCUUUUCUAAGACGGUCUUAGCUAAGAACCGUCUUAGAAAGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771087.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget | |||||||||
XM_006577404.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102670046 (LOC102670046), mRNA | uncharacterized LOC102670046(LOC102670046) | coding protein | psRNATarget |