ncRNA ID | novel_gma_miR623 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:5047200-5047284 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294478;SRR1451657;SRR1451662;SRR1451664;SRR1295520 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GCUCACUUCUCUUUCUGUCAACU - 23 |
Stem-loop(if miRNA) |
--         -    -        A        CU       G   UUGACAGAA GAGA GUGAGCAC CAGAAGCA  UGGUAUA U   ||||||||| |||| |||||||| ||||||||  |||||||   AACUGUCUU CUCU CACUCGUG GUUUUCGU  GUCAUAU U UC         U    U        C        -U       A |
Stem-loop sequence | UUGACAGAAGAGAGUGAGCACACAGAAGCACUUGGUAUAGUUAUAUACUGUUGCUUUUGCGUGCUCACUUCUCUUUCUGUCAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JB170928.1 |
|
1.5 | Sequence 8592 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ242597.1 |
|
1.5 | Sequence 8592 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
HI410467.1 |
|
1.5 | Sequence 8592 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
XM_014768596.1 |
|
2.5 | PREDICTED: Glycine max metallophosphoesterase 1-like (LOC102667430), mRNA | metallophosphoesterase 1-like(LOC102667430) | coding protein | psRNATarget |