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BaseInfo

ncRNA ID novel_gma_miR610
Species Glycine max
Class miRNA
Genome position Chr7:21337915-21337992 [+]
Reference genome Glycine_max_v2.0
Source SRR1451632;SRR1451633;SRR1451636;SRR1451645;SRR1451646;SRR1451648
Length 21
Mature sequence(if miRNA) 58 - UUUUCUGGAAACAACUUGUUC - 78
Stem-loop(if miRNA) --           G       C      UG    C   U
  AUAAGUUGUUU UGGAAAA AUGAUU  GAAU AUG U
  ||||||||||| ||||||| ||||||  |||| |||
  UGUUCAACAAA GUCUUUU UAUUAG  UUUA UAC U
CU           G       A      GU    A   A
Stem-loop sequence AUAAGUUGUUUGUGGAAAACAUGAUUUGGAAUCAUGUUUACAUAAUUUUGGAUUAUAUUUUCUGGAAACAACUUGUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547107.3
ncRNA:21   CUUGUUCAACAAAGGUCUUUU   1
  |=||||*|||||||||||*||
targets:1653   GGACAACUUGUUUCCAGAUAA   1673

2.5 PREDICTED: Glycine max protein FRIGIDA-ESSENTIAL 1-like (LOC100819734), transcript variant X2, mRNA protein FRIGIDA-ESSENTIAL 1-like(LOC100819734) coding protein psRNATarget