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BaseInfo

ncRNA ID novel_gma_miR609
Species Glycine max
Class miRNA
Genome position Chr7:3287310-3287386 [+]
Reference genome Glycine_max_v2.0
Source SRR1451632;SRR1451633;SRR3160569
Length 22
Mature sequence(if miRNA) 1 - AUCAUCAUUUUGAAUUCCUCAG - 22
Stem-loop(if miRNA) --             A         A  ----   UU UUG
  AUCAUCAUUUUGA UUCCUCAGA CU    UGA  C   G
  ||||||||||||| ||||||||| ||    |||  |
  UAGUAGUAAAAUU GAGGAGUUU GG    ACU  G   A
AG             -         C  UUUA   UU UUC
Stem-loop sequence AUCAUCAUUUUGAAUUCCUCAGAACUUGAUUCUUGGACUUGUUUCAAUUUGGCUUUGAGGAGUUAAAAUGAUGAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544946.3
ncRNA:22   GA--CUCCUUAAGUUUUACUACUA   1
  ||--|||||||||||||*||||||
targets:497   CUUCGAGGAAUUCAAAAAGAUGAU   520

1.5 PREDICTED: Glycine max probable calcium-binding protein CML18 (LOC100806182), mRNA probable calcium-binding protein CML18(LOC100806182) coding protein psRNATarget
AK245386.1
ncRNA:22   GA--CUCCUUAAGUUUUACUACUA   1
  ||--|||||||||||||*||||||
targets:489   CUUCGAGGAAUUCAAAAAGAUGAU   512

1.5 Glycine max cDNA, clone: GMFL01-29-C04 NA coding protein psRNATarget