ncRNA ID | novel_gma_miR609 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:3287310-3287386 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451632;SRR1451633;SRR3160569 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUCAUCAUUUUGAAUUCCUCAG - 22 |
Stem-loop(if miRNA) |
--             A         A  ----   UU UUG   AUCAUCAUUUUGA UUCCUCAGA CU    UGA  C   G   ||||||||||||| ||||||||| ||    |||  |   UAGUAGUAAAAUU GAGGAGUUU GG    ACU  G   A AG             -         C  UUUA   UU UUC |
Stem-loop sequence | AUCAUCAUUUUGAAUUCCUCAGAACUUGAUUCUUGGACUUGUUUCAAUUUGGCUUUGAGGAGUUAAAAUGAUGAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003544946.3 |
|
1.5 | PREDICTED: Glycine max probable calcium-binding protein CML18 (LOC100806182), mRNA | probable calcium-binding protein CML18(LOC100806182) | coding protein | psRNATarget | |||||||||
AK245386.1 |
|
1.5 | Glycine max cDNA, clone: GMFL01-29-C04 | NA | coding protein | psRNATarget |